Gene Smed_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3249 
Symbol 
ID5324128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3430501 
End bp3430902 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content59% 
IMG OID640792197 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_001328908 
Protein GI150398441 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAC TTGTGCTTGT CACTCATGGC AAGCTGGCGG ATGAATTTCG GCATGCCTTG 
GAGCACGTCG TCGGTCCGCA AAAAGCAATC GAGACGGTCT GCATAGGCCC CGAGGACGAC
ATGGATCAGC GGCGTCAGGA CATTCTCGAT GCCGTCGAGA AGGTCGATGA AGGCAACGGC
GTCATTATCC TGACGGACAT GTTCGGCGGC ACCCCTTCCA ACCTTGCCAT CTCGGTGATG
CGCGGCGGCA GCGTCGAGGT GATTGCCGGC GTCAACCTGC CGATGCTCAT CAAGCTCGCA
GGCGTGCGCG GCGAAAGCGA TATGGACAAG GCGCTTGTGG AAGCCTCCGA GGCCGGGCGC
AAATACATCA ACGTCGCCAG CCGCGTTCTG AGTGGAAAAT GA
 
Protein sequence
MIGLVLVTHG KLADEFRHAL EHVVGPQKAI ETVCIGPEDD MDQRRQDILD AVEKVDEGNG 
VIILTDMFGG TPSNLAISVM RGGSVEVIAG VNLPMLIKLA GVRGESDMDK ALVEASEAGR
KYINVASRVL SGK