Gene Smed_3241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3241 
Symbol 
ID5324120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3416463 
End bp3416786 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content57% 
IMG OID640792189 
Productthioredoxin 
Protein accessionYP_001328900 
Protein GI150398433 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTG TGAAAGTCGA TACTTCCAAT TTCCAGAAAG AAGTTCTGAA CTCGGCCGAA 
CCGGTCGTCG TCGACTTCTG GGCAGAATGG TGCGGGCCGT GCAAGATGAT TGCACCCAGC
CTCGAAGAAA TCTCCACCGA GCTTGCCGGC AAGGTCAAGG TCGTCAAGCT CAACATCGAC
GAAAACCCCG AGCTCGCGGC GCAGTATGGC GTACGCTCGA TTCCGACGCT TGCCATGTTC
AAGGGCGGCG AAGTCGCCGA CATCAAGGTC GGAGCCGCAC CTAAGACGGC ACTCAGCTCC
TGGATTTCGA ACGCGGTAGC TTAA
 
Protein sequence
MATVKVDTSN FQKEVLNSAE PVVVDFWAEW CGPCKMIAPS LEEISTELAG KVKVVKLNID 
ENPELAAQYG VRSIPTLAMF KGGEVADIKV GAAPKTALSS WISNAVA