Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3204 |
Symbol | |
ID | 5324083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3377873 |
End bp | 3379744 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640792152 |
Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
Protein accession | YP_001328863 |
Protein GI | 150398396 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGATT ATGATGTCAT CGTAATTGGC GGAGGCCATG CGGGTTGTGA GGCCGCAGCG GCGTCGGCTC GGCTCGGCGC GCGCACGCTG CTGATCACGC ATAAGAAAGA TACGATCGGG GTCATGTCCT GCAACCCCGC CATCGGCGGA TTAGGCAAGG GACACCTTGT CCGCGAGATT GATGCTCTCG ATGGCCTTAT GGGGCGCGTT GCTGACGCAG CCGGCATCCA GTTTAGGCTG CTCAATCGAC GCAAGGGACC TGCGGTCCGG GGGCCACGCA CGCAGGCTGA CAGAAAACTA TATCGTGAGG CGATGCAGCG TGAGATTGCT TCGATCGAGA ATCTCGACGT CGCTGAGGGC GATGCGTTTG ACCTGCAGAC GGAGGACGGG GTTGTTTGTG GGGCAGTGAT GAAGGACGGA CGAAGCTTCC GGGCAGCATC CGTAGTCCTC ACAACAGGTA CATTCCTCAG AGGGCTTATC CATATAGGTG ATCGGAAAAT GCCGGCCGGT CGCGTCGGTG AGCAGCCGTC CGTCGGCCTT TCAGAAACGC TGGCACGTTT CGGCCTGCAG CTTGGCCGCT TGAAGACCGG CACGCCGGCA CGCCTGGATG GACGTACCAT CGATTGGGGC CGTGTCGGGC GTCAGGGTCC CGACGAAAAT CCGGTGCCCT TCTCATTCAT GACCGACGCG ATCGTCAACC GTCAGATTGA CTGCGGGGTG ACCCGGACGA CGGATGCGAC GCACAAGATT ATCGCCGACA ACATTCACCG TTCGGCGATG TACTCGGGTC AAATTGAAGG TGTGGGCCCC CGATACTGTC CTTCGATTGA GGACAAGATT GTTCGTTTCG GTGAAAGGGA CGGGCACCAG ATTTTCCTGG AGCCGGAGGG GTTGGACGAT GACACCGTCT ATCCGAACGG GATTTCGACT TCTCTCCCGG AGGATGTGCA GGATGCCTTC ATTCGGACCA TCCCAGGACT TGAACAGGTC ACGATACTTC AGCCGGGCTA TGCCATCGAG TATGATCATG TAGACCCTAG GGAACTTGAA CCGTCTCTCG GCGTGCGTAG GATGCCGGGG CTGTTTCTTG CAGGACAGAT CAATGGCACG ACCGGCTATG AGGAAGCTGG CGCGCAAGGT CTCGTCGCCG GTCTGAATGC CGCGCTCCGT GCAGCTGAAC GCGCTCCGTT CTTCTTCAGC CGAACCGACT CCTATATCGG GGTGATGATC GATGACCTAA CTTCAAGAGG AATAGCTGAG CCGTATCGCA TGTTCACGTC CCGTGCTGAA TACCGGCTGT CCCTGCGGGC GGACAACGCC GACATGCGAC TTACGCCTGT TGGTATCGAA CTCGGATGCG TTGGCAATGC TCGCCTAACC CGCTTTCAAC AGTGGAAGTC TGCCTATGAG GCCGGTCGCA CGCTCCTGCA ATCGCTTTCA GTGACACCGA ATGAAGGCAA GCGTTTCGGC TTGAAGCTTA ATCAGGACGG GCAGCGCCGC ACGGCATTCG AGATTCTCTC CTATCCGGAT CAATCGATCG AGGGTCTGAG GCCGCTTTGG CCGGAGCTTC AGGCCATTGC GACTGATGTT GCCGCCGCGT TGGAGATTGA TGCGGCCTAT GCTGTCTATA TGGAACGGCA GGCCGCCGAC ATCATCGGAG TACAGAGAGA AGAGAGTACA GCCATTCCCG AGGCTTTTGA TTACGAATCG CTGCCTGGGC TTTCGAATGA GCTGAAGCAG AAGCTCGCGC AGCAGAAGCC GCGCAACCTT TCCCAGGCGA TGAAGGTCGA CGGCGTGACA CCCGCGGCCA TTTCACTGAT CCTGTCATGG CTGCGACGAG AAGACCGCCG TTCGAAGCGT GTAGGGGGTT GA
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Protein sequence | MADYDVIVIG GGHAGCEAAA ASARLGARTL LITHKKDTIG VMSCNPAIGG LGKGHLVREI DALDGLMGRV ADAAGIQFRL LNRRKGPAVR GPRTQADRKL YREAMQREIA SIENLDVAEG DAFDLQTEDG VVCGAVMKDG RSFRAASVVL TTGTFLRGLI HIGDRKMPAG RVGEQPSVGL SETLARFGLQ LGRLKTGTPA RLDGRTIDWG RVGRQGPDEN PVPFSFMTDA IVNRQIDCGV TRTTDATHKI IADNIHRSAM YSGQIEGVGP RYCPSIEDKI VRFGERDGHQ IFLEPEGLDD DTVYPNGIST SLPEDVQDAF IRTIPGLEQV TILQPGYAIE YDHVDPRELE PSLGVRRMPG LFLAGQINGT TGYEEAGAQG LVAGLNAALR AAERAPFFFS RTDSYIGVMI DDLTSRGIAE PYRMFTSRAE YRLSLRADNA DMRLTPVGIE LGCVGNARLT RFQQWKSAYE AGRTLLQSLS VTPNEGKRFG LKLNQDGQRR TAFEILSYPD QSIEGLRPLW PELQAIATDV AAALEIDAAY AVYMERQAAD IIGVQREEST AIPEAFDYES LPGLSNELKQ KLAQQKPRNL SQAMKVDGVT PAAISLILSW LRREDRRSKR VGG
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