| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3180 |
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| Symbol | |
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| ID | 5324059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3345216 |
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| End bp | 3347105 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792128 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001328839 |
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| Protein GI | 150398372 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACG TCGTGACAGC GGGCGGCACA AAAGCCGGCC CGATGACCGG CGAGGAGAAG
AAGGTCATCT TCGCCTCGTC GCTCGGTACC GTCTTCGAAT GGTACGATTT CTATCTTTAC
GGCTCACTTG CCGTTTATAT CGGTGCAACC TTCTTCAGCC AGTATCCGGA GACAACGCGC
AACATCTTCG CGCTGCTCGC CTTCGCCGCC GGCTTCCTGG TCCGGCCGTT CGGCGCACTG
GTTTTCGGCC GCCTGGGCGA TCTCGTCGGG CGCAAATACA CGTTCCTCGT CACGATCCTG
ATCATGGGTC TGTCGACATT CCTCGTCGGC GTTCTGCCCG GTGCGGCCTC GATCGGCATC
GCTGCGCCGA TCATCCTGAT CGCGCTCCGC CTCCTGCAGG GCCTCGCGCT TGGCGGTGAA
TACGGCGGTG CTGCAACCTA TGTTGCAGAG CATGCGCCGC ATGGCCGGCG CGGTTATTTC
ACGTCGTGGA TTCAGACGAC GGCGACGCTC GGTCTCTTCC TCTCGCTGGT CGTTATTCTT
CTGGTCCAAT ATATGCTTGG CAAGGAAGCC TTCGCCGAGT GGGGCTGGCG CATACCGTTC
CTCCTATCCT TCGTGCTTCT TGGCGTTTCC GTCTGGATCC GCCTGAAGAT GAACGAATCG
CCTGCCTTCA AGAAGATGAA GGAGGAAGGC AAGGGTTCGA AGGCCCCGCT GACGGAAGCA
TTCGGCCATT GGCGCAACGC CAAGATCGCC CTTCTGGCTC TCTTCGGCGC TGTCGTCGGC
CAGGCCGTGG TCTGGTATTC CGGCCAATTC TACGCGCTGT TCTTCCTGCA GAGCATACTA
AAGGTCGACG GCCAGTCGGC AAACCTGATG GTCGCCGCCT CGCTCCTGCT CGGCACGGGC
TTTTTCGTCT TCTTCGGCTG GCTGTCGGAC AAGATCGGCC GTAAGCCGAT CATCATGGCG
GGCCTTCTGC TTGCCATGCT GACCTACTTC CCGCTGTTCA AAGCGCTGAC CTGGGCCGGC
AATCCCGCAC TTGCGGAAGC GCAGCAGAGC GTCCGCGCAA CCGTTACCGC GGCTCCGGGC
GACTGCAAGT TCCAGTTCAA CCCGACCGGT ACGGCGAAGT TCACCACGTC GTGCGATATA
GCGACCGCGT TCCTGACCAG GAACTCCGTT CCCTACGACG TCGTGACCTC GGCGGCTGCA
GGGACGCCGG CGACGGTGAA GATCGGCGAA ACGACGATCA CCAGCTATGA CGCGATCGCG
GCCGGCGACA AGGCAAAGGC CGAGGAAGCG GCCTTTGGCA AACAGATCAA CATGGCACTG
CAGTCCTCGG GCTATCCGCT GGTGCGCGGA GCCGCCAAGG TGCCGGAATC GAAGCTCGAC
GCTTTCGTCG CGGCTAATCC GGAGCTTGCA CTCGACGCGG CTGCCGTACG CGCCGGCGAA
AAGACCATGG TCCCGGCCGA CAAGCTCGTT GCAGACAAGC TGCTCACGCA GGAAGAGGTC
GGCAGCGCCA CCGAAATGGC CGTCTATTCT ATAGACAAGG GCGGCGCCTT CACCATGGTG
GCCGACCCGG CTCGCGTCAA CTGGACGGTG ATCATCGCCG TGCTGACCGT GCTCGTCATC
TATGTGACCA TGGTCTACGG CCCAATCGCG GCACTGCTCG TCGAGCTCTT CCCGACACGC
ATCCGTTACA CGGGCATGTC GCTGCCTTAC CATATCGGCA ATGGCTGGTT CGGTGGGCTG
CTTCCGGCAA CGGCCTTCGC GATGAGCGCG GCCAAGGGCG ATATCTACTA CGGCCTGTGG
TATCCGATCG TATTTGCGGG CATCACGCTG GTCATCGGCC TTCTGTTCCT GCCCGAAACG
AAGGACCGGG ATATCCACAC GATGGAGTGA
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| Protein sequence | MANVVTAGGT KAGPMTGEEK KVIFASSLGT VFEWYDFYLY GSLAVYIGAT FFSQYPETTR
NIFALLAFAA GFLVRPFGAL VFGRLGDLVG RKYTFLVTIL IMGLSTFLVG VLPGAASIGI
AAPIILIALR LLQGLALGGE YGGAATYVAE HAPHGRRGYF TSWIQTTATL GLFLSLVVIL
LVQYMLGKEA FAEWGWRIPF LLSFVLLGVS VWIRLKMNES PAFKKMKEEG KGSKAPLTEA
FGHWRNAKIA LLALFGAVVG QAVVWYSGQF YALFFLQSIL KVDGQSANLM VAASLLLGTG
FFVFFGWLSD KIGRKPIIMA GLLLAMLTYF PLFKALTWAG NPALAEAQQS VRATVTAAPG
DCKFQFNPTG TAKFTTSCDI ATAFLTRNSV PYDVVTSAAA GTPATVKIGE TTITSYDAIA
AGDKAKAEEA AFGKQINMAL QSSGYPLVRG AAKVPESKLD AFVAANPELA LDAAAVRAGE
KTMVPADKLV ADKLLTQEEV GSATEMAVYS IDKGGAFTMV ADPARVNWTV IIAVLTVLVI
YVTMVYGPIA ALLVELFPTR IRYTGMSLPY HIGNGWFGGL LPATAFAMSA AKGDIYYGLW
YPIVFAGITL VIGLLFLPET KDRDIHTME
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