Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3148 |
Symbol | |
ID | 5324027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3299209 |
End bp | 3300009 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640792096 |
Product | ABC transporter related |
Protein accession | YP_001328807 |
Protein GI | 150398340 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGG CCGCACTGAC GGGTGGAACG CCCAAGATCT CGATCCGGGA TATGACGCTT GTCCATGTGA ACGAAGAACG GCGGCAATCC AATGTTTCCG TCGAAAACCT GACGCTGGAC ATCATGGAGA ATGAATTTCT CTGCGTTGTC GGGCCATCGG GCTGCGGCAA GTCGACCTTG CTTTCGGCAA TCGCCGGATT CATGCAACCG CAGACCGGAA CGGTTACGAT GAACGGAGAG CGCATCACCA AACCCGGCGC GGATCGCGGG GTCGTGTTTC AGGAATATGC GCTTCTGCCG TGGAAAACGG TGCTCGACAA TGTCGCGCTT GGCCTGAAAT TCAGAGGCGT GCCCAGGGCC GATCGGGAGG CGAAAGCGAT GGAATATATC GCGATGGCCC GCCTGACCGA AGCGGCGAAA AAATACCCGC ATGAGCTTTC CGGCGGGATG CGCCAGCGTG CGGCGGTGGC CAGAACGCTG GCGAACACGC CGGAAATCAT GATGATGGAC GAACCTTTCG CCGCAGTCGA CGCGCAGACG CGCCTGTCGC TTCAGGAGGA ATTGCTGCGG GTCTGGAATG ACAATCCGAT CACGGTCCTT TTCATCACTC ATTCAGTTGA AGAGGCCGTG TTTCTTGCAG ACCGGGTCGC AGTCCTGACG CCGGGGCCGG GAAAACTGCG TGAGATCGTG GAGATAGATA TCCCCCGCAA TGCGCGACAC TGGGATACGA TCACAAGTGA CCCGGAATTC ATCGCATTGC GTGACCGGGT CATGGCACTC GTCCGGGATC AAAACGGATG A
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Protein sequence | MNTAALTGGT PKISIRDMTL VHVNEERRQS NVSVENLTLD IMENEFLCVV GPSGCGKSTL LSAIAGFMQP QTGTVTMNGE RITKPGADRG VVFQEYALLP WKTVLDNVAL GLKFRGVPRA DREAKAMEYI AMARLTEAAK KYPHELSGGM RQRAAVARTL ANTPEIMMMD EPFAAVDAQT RLSLQEELLR VWNDNPITVL FITHSVEEAV FLADRVAVLT PGPGKLREIV EIDIPRNARH WDTITSDPEF IALRDRVMAL VRDQNG
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