Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3126 |
Symbol | |
ID | 5324005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3274961 |
End bp | 3275893 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640792076 |
Product | monosaccharide-transporting ATPase |
Protein accession | YP_001328787 |
Protein GI | 150398320 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGT CCACACTGCT GGTGGCCGCA ACCACCGCTT CGGTCCTTGC GCTTCCCGCA TCCGCAGCCG AGGTCAAGAA GATCGGCCTT GCTGTTCCGA ATCTTCAGGC CGACTTCTTC AACCAGATCA AGCTCGGTGT CGAAAAGCAC GCCAGGGAAA AGGGCCTCGA AGTGGTGGTC GTCGACGCGA AGAACGACAC CAACACGCAG GTCAGCCAGG TACAGGACCT GATGATCCAG GACATCGACG CCTTCATCTA TATCCCGGCC GGTGCCGCGG CGGCTGCGGT CCCGACCCGC CTTGCCCGCG AAGCCGGCAT TCCGGTCATC AACGTCGACC GCGTCCCGGA GGGTGCGCCG GGCGACACCT TCATCGCCGG AGAGAGCGTC GAATCCGCCT ACGCCGTCTG CAAGTTCATC ATCGAGAAGG CCGGCGGCTC GGGCAAGATG GCAATCATCC ACGGGCAGAA GGGCACAACG CCGGAGGTCG ACCGCTTCAC CGGCTGCAAG CGCGCCATTG ACGAGAACAA GGGCGTCGAG CTTATCGACC AGCAGTGGAG CAACATGTGG TCGGCCGATG AAGGCTTCTC GATCGCGCAG AACATGCTGC AGGCAAATCC GGACATCACG ATCATTTTCG GCCAGGCCGA CGGTCTCGCC ATGGGGGCGG CCAAGGCGGT CGACGTCGCC AATCTCTCCG ACAAGGTGAT CATCGGCGGC TATGACGGCG ACGTCTCGGC GCTCGAATAC CTCGCCAGGT GCAAGGGCCC GTTCATCGCC ACCGCAACGC AGAGCACGCA AAAAATGGGC GTTCTTGCCG TCGAATCCGC ACTTGCCGTT GCGGCGGGCG AGAAGGTCGA AGAGCGTCAG ACGCCGAATG CCGTGCTGAC GACCTGCGAC AACGCTCCGG AATTCGTAAA GAACCATCCG TAA
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Protein sequence | MKLSTLLVAA TTASVLALPA SAAEVKKIGL AVPNLQADFF NQIKLGVEKH AREKGLEVVV VDAKNDTNTQ VSQVQDLMIQ DIDAFIYIPA GAAAAAVPTR LAREAGIPVI NVDRVPEGAP GDTFIAGESV ESAYAVCKFI IEKAGGSGKM AIIHGQKGTT PEVDRFTGCK RAIDENKGVE LIDQQWSNMW SADEGFSIAQ NMLQANPDIT IIFGQADGLA MGAAKAVDVA NLSDKVIIGG YDGDVSALEY LARCKGPFIA TATQSTQKMG VLAVESALAV AAGEKVEERQ TPNAVLTTCD NAPEFVKNHP
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