| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3110 |
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| Symbol | |
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| ID | 5323989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3256627 |
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| End bp | 3258138 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792060 |
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| Product | peptidase M48 Ste24p |
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| Protein accession | YP_001328771 |
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| Protein GI | 150398304 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4784] Putative Zn-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAGGC AGGCAGTCAA GAATGACTGG TTTCCGCGGC GGCATGGAAC CGTGCGCGCA
CGAGCGTTGG TTGTATTGGC GGCCACGACG CTGGTCGCCG GCTGCCAGTC GGTAATCGAA
CAGACCTACG AGCCGACCGT TTCGCCATCC TCCAATCCGC AGATCGTCGA AGAGGTGCAG
AAGAACGATC CGCGTGCCCA ACTCGGCGCA CGCGAACATC CGCGCATCGT TGCGAGCTAT
GGCGGTGAGT ACCGCGACGC CAAGACAGAG CGGCTGGTCG CCCGGATCAC CGGCGCCCTG
ACGGCCGTTT CGGAAAATCC CCAGCAATCC TACCGCATCA CCATTCTCAA TTCGCCGGCG
ATCAACGCTT TCGCGCTCCC CGGCGGCTAT CTCTACGTCA CGCGGGGTCT GCTGGCGCTT
GCCAACGACG CCTCTGAAGT GGCAGCCGTG CTCTCGCACG AGATGGCCCA TGTGACGGCC
AATCACGGCA TTCAGCGACA GCAGCGCGAG GAGGCGGAGG TGATCGCCAG CCGCGTCGTT
TCCGAGGTGC TGTCTTCCGA TCTCGCCGGC AAACAGGCGC TTGCCCGGGG TAAGCTGCGC
CTCGCGGCCT TTTCACGCAA TCAGGAACTG CAGGCGGACG TGATCGGCGT CCGCATGCTG
GGAGAAGCGG GCTACGATCC CTATGCGGCG GCACGCTTTC TCGATTCCAT GGCTGCCTAT
AGCCGCTTCA GTGCGGTCGA TCCGGAGGCA GACCAGAGCC TGGACTTTCT GTCGAGCCAC
CCTAACGCGC CGCAGCGCGT CGACCTCGCG CGACGGCATG CGCGTGCCTT TGGTCTCGAG
GGCACAAGCG GCGATCGCGG GCGCGACTAC TATCTCGCGG GAATCGACGG TATCCTCTAT
GGCGACAGTC CGCAGGAAGG CTATGTCCGT GGACAGACCT TCCTGCACGG CCAGCTCGGC
ATACGCTTCG ACGTGCCCAC AGGTTTTCAG ATCGACAACA AGGCAGAGGC CGTACTTGCC
ACGGGTCCTG GTGAAGTGGC CGTCCGTTTC GACGGCATCG CCGATACGAG CGGGCGCAAC
CTGACCGATT ACATCGCCAG CGGCTGGGTG ACCGGCCTCA AGCCCGATAC GATCCGTTCC
ATCCGGGTCA ATGGTCTGGA GGCCGCGACG GCGCGCGCCT CCGCCGACCG CTGGGATTTC
GACGTCACGG TGATCAGGCT CGGCGAGCGC ATATACCGCT TTCTGACGGC CGTTCCAAAG
GGTTCCAGCG CACTGCAGCC GACAGCGGAC CAGCTGCGCA CGTCCTTCCG ACGGATGACG
TCTGGCGAAG TTCAGTCGCT GAAGCCGCTG CGTGTCCGGG TGGTCACGGT CCGGTCCGGC
GACACGACCG CGACACTGGC GGCGCGCATG ATGGGCACCG ACCGGAAGCT CGACCTCTTT
CGCCTGATCA ATGCGATGCA GATCACCTCC ACCGTCAGAC CGGGCGACAA GGTGAAGATC
ATTTCCGAGT GA
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| Protein sequence | MIRQAVKNDW FPRRHGTVRA RALVVLAATT LVAGCQSVIE QTYEPTVSPS SNPQIVEEVQ
KNDPRAQLGA REHPRIVASY GGEYRDAKTE RLVARITGAL TAVSENPQQS YRITILNSPA
INAFALPGGY LYVTRGLLAL ANDASEVAAV LSHEMAHVTA NHGIQRQQRE EAEVIASRVV
SEVLSSDLAG KQALARGKLR LAAFSRNQEL QADVIGVRML GEAGYDPYAA ARFLDSMAAY
SRFSAVDPEA DQSLDFLSSH PNAPQRVDLA RRHARAFGLE GTSGDRGRDY YLAGIDGILY
GDSPQEGYVR GQTFLHGQLG IRFDVPTGFQ IDNKAEAVLA TGPGEVAVRF DGIADTSGRN
LTDYIASGWV TGLKPDTIRS IRVNGLEAAT ARASADRWDF DVTVIRLGER IYRFLTAVPK
GSSALQPTAD QLRTSFRRMT SGEVQSLKPL RVRVVTVRSG DTTATLAARM MGTDRKLDLF
RLINAMQITS TVRPGDKVKI ISE
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