Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3099 |
Symbol | trmD |
ID | 5323978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3245086 |
End bp | 3245808 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640792049 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_001328760 |
Protein GI | 150398293 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.388944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.776842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTTTC GTGCAACGGT CCTGACGCTC TATCCCGAAA TGTTCCCCGG ACATCTCGGC GTTTCGCTCG CCGGAAAGGC ACTGGAGCGC GGGGATTGGT CGATCGAAGC CGTGCAGATA CGCGACTTCG CCGGCGACAG GCACCGCACG GTAGACGACA CGCCGGCCGG CGGAGGCGCC GGAATGGTGC TGAAGCCCGA CGTTCTTGCC CGCGCTATCG ACCATGTTTC GGCAGATGAC GAGCGACCGC GGCTTCTGAT GAGCCCGCGC GGGCGGCCGC TGACGCAGGA ACGGGTGCGC GCGCTGGCCG CCGGTCCCGG CGTCGTCGTC GTTTGCGGCC GTTTCGAGGG TGTCGATCAG CGGGTCATCG ATACGCGCCA GCTGGAGGAA GTCTCGATCG GCGACTACAT TCTTTCCGGC GGCGAACCGG CGGCACTGGT CCTGCTGGAC GCGGTGGTGC GCATTCTGCC GGGCGTCATG GGAAACGAAC TCTCGGGCGT GCACGAGAGC TTCGAAGGAG GGTTGCTGGA GCATCCCCAC TACACGCGTC CCCAGGTCTT CGAGGGTCAA GAAATACCAG CCGTGCTCAC GTCAGGCAAT CACGCCGCTA TAGCCCAATG GCGATTGGTC GCCGCCCGCC GGCTGACCGC CGAGCGCCGG CCGGACCTCC TGGAGCGTGA TCTGAAACCG CAGCCTGATC CGGCTCAACC CGTGAAGAAG TAA
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Protein sequence | MLFRATVLTL YPEMFPGHLG VSLAGKALER GDWSIEAVQI RDFAGDRHRT VDDTPAGGGA GMVLKPDVLA RAIDHVSADD ERPRLLMSPR GRPLTQERVR ALAAGPGVVV VCGRFEGVDQ RVIDTRQLEE VSIGDYILSG GEPAALVLLD AVVRILPGVM GNELSGVHES FEGGLLEHPH YTRPQVFEGQ EIPAVLTSGN HAAIAQWRLV AARRLTAERR PDLLERDLKP QPDPAQPVKK
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