Gene Smed_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3096 
Symbol 
ID5323975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3243630 
End bp3243965 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content59% 
IMG OID640792046 
Productchorismate mutase 
Protein accessionYP_001328757 
Protein GI150398290 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01795] monofunctional chorismate mutase, alpha proteobacterial type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.608239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATC CCGGGATCAA AGAGGAATTG GCGAGCTACC GGCAATCGAT CGACAATATC 
GATGCCGCGC TCGTCCACAT GCTGGCCGAA CGCTTCCGCT GCACCAAGGC GGTTGGCGTG
CTCAAGGCCA AGCACCAGTT GCCGCCGGCC GATCCGGCGC GCGAAGAATA CCAGATTGAA
CGCCTTCGAC ACCTCGCCAA GGATGCCAAT CTGGATCCGG ATTTCGCCGA GAAGTTCCTG
AACTTCATCA TCAAGGAAGT CATCCGGCAT CATGAAGCCA TCGCCGCCGA TTGCTCGCAT
TCCGCGGGCA ACGCCGGCAA CACACATTCC GCTTGA
 
Protein sequence
MLDPGIKEEL ASYRQSIDNI DAALVHMLAE RFRCTKAVGV LKAKHQLPPA DPAREEYQIE 
RLRHLAKDAN LDPDFAEKFL NFIIKEVIRH HEAIAADCSH SAGNAGNTHS A