Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3082 |
Symbol | |
ID | 5323961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3228754 |
End bp | 3229542 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640792032 |
Product | hypothetical protein |
Protein accession | YP_001328743 |
Protein GI | 150398276 |
COG category | [S] Function unknown |
COG ID | [COG5429] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTCG CCTGCAAACC AACGATCCGA CGTCTCGCCC TGACGGTCGG GCTGTTCGGC GCGATCAGCG GTACGGCTGC AGCGGAAGAC GGCAAACCGA TGGGCGATGG GGCGATCAAG GGCGTCGTCG AACTCTTCAC CAGCCAGGGC TGTTCCTCTT GCCCGCCGGC CGATGCGGCA CTCAAGAAGC TCGTCGATGA AGGCGGCGTC GTCGCGCTCG CTTACCATGT TGACTATTGG AATTATCTAG GTTGGGCGGA TACGCTCGCG TCCAAGCAAA ACACCGAGCG GCAATATGCT TATGCGCGGA TGCTCGGGCG TTACGGCGTC TATACGCCCC AGGCCATTCT GAACGGACGC GATCACACGA ACGGCTCGGA CCTTCCGGCA ATCAAGAACC GCCTCGCCTT GATGGAGGCG AAAGGAAAGG GCCTGTCGGT GCCGGTCGAC GCTTCCATCG GCGGCGATGA AATATCGATC AAGGTCGGTG CCGGGACCGG CAGGGCGAAT GTCGTCGTCG TCTATTTCGA CCGTGCAAGA GTGGTCAATG TCGAGAAGGG TGAGAACAGC GGCAAGAAGA TCGCCTACTG GCACGCCGTG CGGGATATCC AGACGATCGG CATGTGGGAC GGCAAGCCCG CGGAGTTCAC GCTGCCCGCC TCGGTTCTCA TCGAAGGCCA GGGAAACAGC GGCTGCGCCG TGCTGCTGCA ATCGATGAAG GACAAGGAAA CGCCGGGGGC GATCATCGGC GCCGCAACCG TTCTCGCGGG GCCGCAAGGG AAGCTCTGA
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Protein sequence | MIFACKPTIR RLALTVGLFG AISGTAAAED GKPMGDGAIK GVVELFTSQG CSSCPPADAA LKKLVDEGGV VALAYHVDYW NYLGWADTLA SKQNTERQYA YARMLGRYGV YTPQAILNGR DHTNGSDLPA IKNRLALMEA KGKGLSVPVD ASIGGDEISI KVGAGTGRAN VVVVYFDRAR VVNVEKGENS GKKIAYWHAV RDIQTIGMWD GKPAEFTLPA SVLIEGQGNS GCAVLLQSMK DKETPGAIIG AATVLAGPQG KL
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