Gene Smed_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3082 
Symbol 
ID5323961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3228754 
End bp3229542 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content62% 
IMG OID640792032 
Producthypothetical protein 
Protein accessionYP_001328743 
Protein GI150398276 
COG category[S] Function unknown 
COG ID[COG5429] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTCG CCTGCAAACC AACGATCCGA CGTCTCGCCC TGACGGTCGG GCTGTTCGGC 
GCGATCAGCG GTACGGCTGC AGCGGAAGAC GGCAAACCGA TGGGCGATGG GGCGATCAAG
GGCGTCGTCG AACTCTTCAC CAGCCAGGGC TGTTCCTCTT GCCCGCCGGC CGATGCGGCA
CTCAAGAAGC TCGTCGATGA AGGCGGCGTC GTCGCGCTCG CTTACCATGT TGACTATTGG
AATTATCTAG GTTGGGCGGA TACGCTCGCG TCCAAGCAAA ACACCGAGCG GCAATATGCT
TATGCGCGGA TGCTCGGGCG TTACGGCGTC TATACGCCCC AGGCCATTCT GAACGGACGC
GATCACACGA ACGGCTCGGA CCTTCCGGCA ATCAAGAACC GCCTCGCCTT GATGGAGGCG
AAAGGAAAGG GCCTGTCGGT GCCGGTCGAC GCTTCCATCG GCGGCGATGA AATATCGATC
AAGGTCGGTG CCGGGACCGG CAGGGCGAAT GTCGTCGTCG TCTATTTCGA CCGTGCAAGA
GTGGTCAATG TCGAGAAGGG TGAGAACAGC GGCAAGAAGA TCGCCTACTG GCACGCCGTG
CGGGATATCC AGACGATCGG CATGTGGGAC GGCAAGCCCG CGGAGTTCAC GCTGCCCGCC
TCGGTTCTCA TCGAAGGCCA GGGAAACAGC GGCTGCGCCG TGCTGCTGCA ATCGATGAAG
GACAAGGAAA CGCCGGGGGC GATCATCGGC GCCGCAACCG TTCTCGCGGG GCCGCAAGGG
AAGCTCTGA
 
Protein sequence
MIFACKPTIR RLALTVGLFG AISGTAAAED GKPMGDGAIK GVVELFTSQG CSSCPPADAA 
LKKLVDEGGV VALAYHVDYW NYLGWADTLA SKQNTERQYA YARMLGRYGV YTPQAILNGR
DHTNGSDLPA IKNRLALMEA KGKGLSVPVD ASIGGDEISI KVGAGTGRAN VVVVYFDRAR
VVNVEKGENS GKKIAYWHAV RDIQTIGMWD GKPAEFTLPA SVLIEGQGNS GCAVLLQSMK
DKETPGAIIG AATVLAGPQG KL