Gene Smed_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3061 
Symbol 
ID5323940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3209812 
End bp3210291 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content62% 
IMG OID640792011 
ProductMarR family transcriptional regulator 
Protein accessionYP_001328722 
Protein GI150398255 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGGA AACTCGAGTC CGATACGATC GGGATGCTCC TCACCGATGT TTCACGCCTG 
TTGCGCGGAG CCTTCGATCG CAAGGTCAAC GCGATGAACC TTGGGATCAC CCCCGGCGAA
GCGCGCACAC TGGTCCAGGT GGCCGTTACC GAAGGCATCA AGCAGGCGGA GATCGCGACC
CGGATGGGAA TCGAGCCCAT GACGCTCTCG GCCTATCTCG ACCGGCTCGA AGCAATGGGT
CTTGTCATGC GGATACCGGA TCCCGCGGAC CGGCGCGCCA AGAACGTCGT CGTAACGGAC
AAGGCCGACC CGCTCATCAC CGAGCTGATG TCCGGTCTGC GGGAGATGAT GAAAGCCTAC
ACGGAGGATC TGGGGGACGA AGGACGCGAG GTCCTGCGTG CAAACCTGAG GATTCTCCGT
GACAGTCTCC ACCGCCTCGA TCCATGCCTC GCCGGCAAGG GGAAGGGGGA GGCCGAATGA
 
Protein sequence
MPRKLESDTI GMLLTDVSRL LRGAFDRKVN AMNLGITPGE ARTLVQVAVT EGIKQAEIAT 
RMGIEPMTLS AYLDRLEAMG LVMRIPDPAD RRAKNVVVTD KADPLITELM SGLREMMKAY
TEDLGDEGRE VLRANLRILR DSLHRLDPCL AGKGKGEAE