| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3005 |
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| Symbol | rplU |
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| ID | 5323883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3155222 |
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| End bp | 3155596 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791955 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_001328667 |
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| Protein GI | 150398200 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.765258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGCAG TCATCAAGAC CGGCGGTAAG CAGTACCGCG TGGCGGCCAA TGACGTCATC
ACCATCGAAA AGCTGGATGG CGCTGCTGGC GACAAGATCG AATTCACCGA GATCCTGATG
GTCGGCGCCG GGGCCGACGC CACCATCGGT GCTCCGTTCG TAGAAGGTGC CGTCGTCAGC
GCCGAGGTTG TGGATCATGG CCGCGCCAAG AAGGTCATCG CCTTCAAGAA GCGCCGCCGC
CAGAACTCCA AGCGCACGCG CGGCCATCGC CAGCATCACA CGATCGTCCG TATTCTGGAC
ATCGCTGCCG CTGGCGGCAA GGCGAAGAAG GCTTCGAAGA AGGCTGAAGC CGCCGCCGAA
GAAGCTGCAA ACTGA
|
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| Protein sequence | MFAVIKTGGK QYRVAANDVI TIEKLDGAAG DKIEFTEILM VGAGADATIG APFVEGAVVS
AEVVDHGRAK KVIAFKKRRR QNSKRTRGHR QHHTIVRILD IAAAGGKAKK ASKKAEAAAE
EAAN
|
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