Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2997 |
Symbol | |
ID | 5323874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3148112 |
End bp | 3148783 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640791948 |
Product | signal-transduction protein |
Protein accession | YP_001328661 |
Protein GI | 150398194 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGTCA AGGATGTGAT GACGACAAAG GTCGTCAAAC TGTCGCCTGA CAACAGCGTC AGACAGGCAG CCAAGCTGAT GTTCGACTAC CACGTAAGCG GCGTCCCGGT CGTTAACGAC GATGGGCGCT TGCTCGGCGT CATCAGCGAG GGCGACCTGA TCCGGCGGAC GGAACTCTGC AGCGGAGCAT CCGTGTTGAT GGCGGACATG ACGATCGATC CCGTTAACAG GGCGAACGCC TTCATCCGGC GATGCTCGTG GCGCGTCGGC GACGTCATGA CGGCCGACCC CGTAACCATC GAGGAGGAAG CGCCCCTTGC GCGCGTGGCA GGGCTCATGC AGGAACGCGG CATCAAGCGC ATCCCCGTAA TGCGCGATGG AGAACTGGTC GGCATCGTCA GCCGCGCCGA CCTCCTGCAG GCAATTTTTT CAACGAAGCC AGACGAAACA GCAGCGGGCG ACGAAGCCAT TCGACGCAGC ATCCTTGTTC GCCTCGGGGA AAACACGGGT CTGGAGGAAC TGGATGTGAC TGTCACGGTC ACCGAGGGGA TCGTGCACTT TTGGGGCCAA GTCGAGACGG CGGCTTGTCG CAGGGCCGCG CGGATCGTGG CTGAGAGTGT CCACGGGGTC AGGGGCATCG TGGAGCATTT TCCAGATCCC TACACGCAAT AG
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Protein sequence | MLVKDVMTTK VVKLSPDNSV RQAAKLMFDY HVSGVPVVND DGRLLGVISE GDLIRRTELC SGASVLMADM TIDPVNRANA FIRRCSWRVG DVMTADPVTI EEEAPLARVA GLMQERGIKR IPVMRDGELV GIVSRADLLQ AIFSTKPDET AAGDEAIRRS ILVRLGENTG LEELDVTVTV TEGIVHFWGQ VETAACRRAA RIVAESVHGV RGIVEHFPDP YTQ
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