Gene Smed_2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2997 
Symbol 
ID5323874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3148112 
End bp3148783 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content61% 
IMG OID640791948 
Productsignal-transduction protein 
Protein accessionYP_001328661 
Protein GI150398194 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTCA AGGATGTGAT GACGACAAAG GTCGTCAAAC TGTCGCCTGA CAACAGCGTC 
AGACAGGCAG CCAAGCTGAT GTTCGACTAC CACGTAAGCG GCGTCCCGGT CGTTAACGAC
GATGGGCGCT TGCTCGGCGT CATCAGCGAG GGCGACCTGA TCCGGCGGAC GGAACTCTGC
AGCGGAGCAT CCGTGTTGAT GGCGGACATG ACGATCGATC CCGTTAACAG GGCGAACGCC
TTCATCCGGC GATGCTCGTG GCGCGTCGGC GACGTCATGA CGGCCGACCC CGTAACCATC
GAGGAGGAAG CGCCCCTTGC GCGCGTGGCA GGGCTCATGC AGGAACGCGG CATCAAGCGC
ATCCCCGTAA TGCGCGATGG AGAACTGGTC GGCATCGTCA GCCGCGCCGA CCTCCTGCAG
GCAATTTTTT CAACGAAGCC AGACGAAACA GCAGCGGGCG ACGAAGCCAT TCGACGCAGC
ATCCTTGTTC GCCTCGGGGA AAACACGGGT CTGGAGGAAC TGGATGTGAC TGTCACGGTC
ACCGAGGGGA TCGTGCACTT TTGGGGCCAA GTCGAGACGG CGGCTTGTCG CAGGGCCGCG
CGGATCGTGG CTGAGAGTGT CCACGGGGTC AGGGGCATCG TGGAGCATTT TCCAGATCCC
TACACGCAAT AG
 
Protein sequence
MLVKDVMTTK VVKLSPDNSV RQAAKLMFDY HVSGVPVVND DGRLLGVISE GDLIRRTELC 
SGASVLMADM TIDPVNRANA FIRRCSWRVG DVMTADPVTI EEEAPLARVA GLMQERGIKR
IPVMRDGELV GIVSRADLLQ AIFSTKPDET AAGDEAIRRS ILVRLGENTG LEELDVTVTV
TEGIVHFWGQ VETAACRRAA RIVAESVHGV RGIVEHFPDP YTQ