Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2989 |
Symbol | |
ID | 5323866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3135916 |
End bp | 3136494 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640791940 |
Product | isochorismatase hydrolase |
Protein accession | YP_001328653 |
Protein GI | 150398186 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.486684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCAG GAAAATGGAC TCACCTGTGC ATAGATATGC AACGCATGTT CGCCGAAACC ACCCCCTGGC AAGTCGCCTG GATACCCAAG GTGTTCGATC AGGTTGCCGA GGTTGCGACC CGATTTCCCG ATCGCACTAT ATTCACACGT TTCGTGCCGC CGTCCTCCCC AGAGGAGATG GCGGGCATGT GGAGGCCATA CTACGAAAAG TGGCCGATGA TGACGACCAG CGAACTGGAC CCCGCTTTGG TGGATCTTGT TCCGGACCTG AAAAGGTTGG TTCCGCCCGC CCGCCTTTTC GACAAGACCA CTTACTCGCC TTGGACCAGC GGTCGATTAC ATACCGCGTT GCTTCATCAG GGTATTGGAA CGCTGGTCGT AACAGGAGGC GAGACGGACA TCTGTGTGCT GGCCACGACG CTCGGGGCTG TCGATCTCGG TTACAAGGTC GTCCTGCTGA AGGACGCGCT GTGGAGTACG ACTGATCAAA CGCACGACGC ATCGCTGCAA CTTCTGGGCA ATCGGTTTTC AGTTCAAGTG GAGGTCATAA ACACGGAAGA ATGGCTGTCC TCACTTTAG
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Protein sequence | MNPGKWTHLC IDMQRMFAET TPWQVAWIPK VFDQVAEVAT RFPDRTIFTR FVPPSSPEEM AGMWRPYYEK WPMMTTSELD PALVDLVPDL KRLVPPARLF DKTTYSPWTS GRLHTALLHQ GIGTLVVTGG ETDICVLATT LGAVDLGYKV VLLKDALWST TDQTHDASLQ LLGNRFSVQV EVINTEEWLS SL
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