Gene Smed_2959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2959 
Symbol 
ID5323836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3107444 
End bp3107836 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content58% 
IMG OID640791910 
Productsuccinate dehydrogenase cytochrome b556 subunit 
Protein accessionYP_001328623 
Protein GI150398156 
COG category[C] Energy production and conversion 
COG ID[COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 
TIGRFAM ID[TIGR02970] succinate dehydrogenase, cytochrome b556 subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0396146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATG TCACAAGAAG CCGGCCGCTC TCGCCGCATC TTCAAATTTA CAAGCCGATT 
CCCACCATGA TCATGTCGAT TATGCACCGC ATCACCGGCG GTGCACTCTA TTTCGGCACG
GTCCTCGTGG CATGGTGGCT GATCGCTGCA GCTTCGGGCA CTGCCTATTA CGACTGGGTG
AACTGGTTTT TCGGAACGCT CATCGGCAAG GTGGTTCTCT TCGGTTACAC CTGGGCGCTG
ATGCATCATC TGCTGGGCGG TATCCGCCAC CTCGGATGGG ATCTCGGCTA TGGCTACGAA
AAGCACTTCG CGACCCGGGT GGCGAAGGCG ATGATCGTCG CATCGGCGGC GCTGACGCTC
GTCATCTGGA TCGTCGGCTA TCTCGCTCGT TAA
 
Protein sequence
MTNVTRSRPL SPHLQIYKPI PTMIMSIMHR ITGGALYFGT VLVAWWLIAA ASGTAYYDWV 
NWFFGTLIGK VVLFGYTWAL MHHLLGGIRH LGWDLGYGYE KHFATRVAKA MIVASAALTL
VIWIVGYLAR