Gene Smed_2916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2916 
Symbol 
ID5323793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3060884 
End bp3061741 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content61% 
IMG OID640791867 
ProductABC-3 protein 
Protein accessionYP_001328580 
Protein GI150398113 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCA TGCTCGCCGA GCCGTTCTCC TATAGCTATA TGGTCAATGC CATGTGGGTC 
AGTGCGCTCG TTGGCGCGGT CTGTGCCTTT CTGTCAGCCT ATCTCATGCT GAAAGGCTGG
TCGCTGATCG GCGATGCGCT CTCCCACTCG ATCGTGCCGG GAGTTGCCGG CGCCTATATG
CTCGGGCTCC CTTTCTCGCT TGGCGCCTTC TTCTCCGGTG CGCTGGCCGC GGCGGCAATG
CTGTTCCTGA ACCAGCGCAC GCGGCTGAAG GAGGACACGA TCATCGGCCT GATCTTCACC
TCCTTCTTCG GGCTCGGCCT GTTCATGGTC TCCCTCTCGC CAACCTCGGT GAATATCCAG
ACGATCGTGC TGGGCAACAT ACTCGCAATA ACGCCGGCCG ACACCGTACA GCTTGCCATC
ATCGGCATCG TCTCGCTGCT GATCCTGTGG GCGAAGTGGA AGGATCTGCT GGTGACCTTC
TTCGATGAAA GCCACGCCCG TTCGATCGGC ATCAACACCA CCTTTCTCAA AATTCTCTTC
TTCACGCTGC TCTCGGCCTC GACGGTAGCG GCGCTGCAGA CGGTCGGCGC CTTTCTGGTC
ATCGCCATGG TCGTAACCCC CGGCGCGACC GCCTATCTCC TGACCGACCG TTTCCCGCGG
CTGATCTTGA TCAGCATCGT CATAGGGGCA CTGACGAGCT TCTTTGGAGC CTATGCGAGC
TACTTCCTGG ACGGCGCCAC CGGCGGCATC ATCATCGTGC TGCAGACGCT GATCTTCCTG
TTCGCCTTCG TGTTCGCCCC CAAACACGGG CTGCTCGCCG CCCGCCGCCG CTCAACGGAA
GCTCTGGAGA CCGCATGA
 
Protein sequence
MIAMLAEPFS YSYMVNAMWV SALVGAVCAF LSAYLMLKGW SLIGDALSHS IVPGVAGAYM 
LGLPFSLGAF FSGALAAAAM LFLNQRTRLK EDTIIGLIFT SFFGLGLFMV SLSPTSVNIQ
TIVLGNILAI TPADTVQLAI IGIVSLLILW AKWKDLLVTF FDESHARSIG INTTFLKILF
FTLLSASTVA ALQTVGAFLV IAMVVTPGAT AYLLTDRFPR LILISIVIGA LTSFFGAYAS
YFLDGATGGI IIVLQTLIFL FAFVFAPKHG LLAARRRSTE ALETA