| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2860 |
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| Symbol | |
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| ID | 5323730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2987370 |
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| End bp | 2988299 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791805 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001328525 |
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| Protein GI | 150398058 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGGGC CCGCCGCCAA GCGTGAAGCC GTCGCGCATC TGAAGGCCGT CATGGGCCTC
TCGGAGCGGC GGGCCTGCCA GATCATCTCC GCTGACCGGA AGATGGTGCG CTATCGGTCA
CGCCGACCGT CAGAGGCCGA ACTGCGGAAG AAGCTTCGCG ACCTCGCCAA CGAGCGACGG
CGTTTCGGCT ACCGGCGACT GTTCGTCCTG CTCAGGCGGG AGGGAGAGCC GTCCGGCGTC
AACCGCATCT ATCGGCTGTA TCGCGAGGAA GGGCTTTCGG TTCGCAAGCG GAAAGCCAGG
CGGCGTGCCG TCGGCACGCG TGCGCCGATA CTGGTCGAAG CGAAGGCCAA TGCCCGCTGG
TCGCTGGATT TCGTCCATGA TCAGTTCGCC TGCGGAAGAA GATTTCGCGT GCTCAACATC
GTCGATGACG TGACGCGCGA ATGCCTGGCA GCGATCCCCG ACACCTCGAT CTCCGGCCGT
CGTGTTGCTC GCGAATTGAC GGCGCTCCTC GAGCGGCGCG GCAAGCCCGG CATGATTGTC
TCCGACCATG GCACGGAATT CACGTCGAAC GCGATCCTCG CCTGGTCAAA GGAGCACAAG
GTCGAGTGGC ACTACATCGC ACCGGGAAAG CCGATGCAGA ACGGTTATAT CGAGTCCTTC
AACGGGCGGA TGCGCGACGA GCTGCTGAAC GAAAGCCTGT TCTTCGGTCT CGATCATGCC
CGCAGCGCCA TCGCCGAATG GGCAGACGAT TATAACCATT CCCGGCCGCA CTCATCGCTC
GGATATCAGA CCCCGGCACG CTATGCCGGA ACCATCGCCG CAACCGGCTT CAACGCTGTG
CAAGATGAAG GCTACGCGTT TCCGCCGGTT GCTCCCACCG CGCCAAGTGG CGTAATGAAA
ACCGCCGAGG CTCTAATCGC CGCTGGATGA
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| Protein sequence | MVGPAAKREA VAHLKAVMGL SERRACQIIS ADRKMVRYRS RRPSEAELRK KLRDLANERR
RFGYRRLFVL LRREGEPSGV NRIYRLYREE GLSVRKRKAR RRAVGTRAPI LVEAKANARW
SLDFVHDQFA CGRRFRVLNI VDDVTRECLA AIPDTSISGR RVARELTALL ERRGKPGMIV
SDHGTEFTSN AILAWSKEHK VEWHYIAPGK PMQNGYIESF NGRMRDELLN ESLFFGLDHA
RSAIAEWADD YNHSRPHSSL GYQTPARYAG TIAATGFNAV QDEGYAFPPV APTAPSGVMK
TAEALIAAG
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