| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2856 |
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| Symbol | |
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| ID | 5323726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2982818 |
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| End bp | 2983834 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791801 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001328521 |
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| Protein GI | 150398054 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.135331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.843723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACTA CCAATCCCGA TCTCGTTGAA CTTCGGGACC TGAAGGTCGC TTTCGACGGC
GTCCAGGTTC TGCATGGCAT CGATCTCACT GTCGCCAGAG GAGAAGCCCT CGGCCTTGTG
GGTGAATCCG GGTGCGGCAA GTCCGTGACC TGGCTCGCGG CGCTGGGGCT GCTTCCGGGC
AAGGCCGCCG TCACTGGGTC GATCCGGGTC GACGGGCGGC AACTATGCGG GGCAGAACGC
TCCGACCTGG AAGAGGTTCG CGGCGGGCGT ATCGCAATGA TTTTCCAGGA CCCGTCAAGC
TCGCTCAATC CCGTATTGCG CATCGGACGC CAGATCGTCG AGGCACTGCA GATCCACCGC
GGGCTTCGCG GCCAAGCGGC CCGCACCGAG GCACTCCGGT TGCTGGACAT GGTTGGAATC
CCCGATGCCC CACGGCGCTT CGATCTCTAT CCGCACGAAT TTTCAGGTGG ACAGTGTCAG
CGCCTGATGA TCGCGATGGC GCTCGCGGGT GAACCGGACC TGCTTGTCGC CGACGAACCG
ACGACGGCGC TGGACGCGAC CATTCAGGCA CAGATACTGG ACCTTCTGAA CGCGCTTAGA
GCCGAGACGG GCATGGCGCT CGTATTCATC AGCCATGATC TCGGCGCGGT TTCGCAGGTT
TGCGAGCGCG TATGTGTGAT GTATGCGGGC CGTATCGTCG AAGAGGGAAG CGTCGCGCAA
CTCTTTTCCC AGCCGCGCCA TCCCTATACG CGCGGACTGT TCGATGCCAT TCCGCGCATC
GACGGGCCGC GCGATCGGCT GATCCCGATT CCGGGGACGG TGCCCAACCC GAAGCATCTG
CCTGCCGGCT GTTCCTTCTC CCCCCGCTGC CCCTATGCGG TGGATGCCTG CGGCAGCACG
TACCCGTCTC TGGAATTCCA AGGCGACGGG CGTCGCCTGG CCTGCATGCG CCCGGTACCG
GCGGTCACGA CGTCCGGCGA AGCGAAGAGA CGAATTCACG AAGGGCTGAT GGCGTGA
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| Protein sequence | MGTTNPDLVE LRDLKVAFDG VQVLHGIDLT VARGEALGLV GESGCGKSVT WLAALGLLPG
KAAVTGSIRV DGRQLCGAER SDLEEVRGGR IAMIFQDPSS SLNPVLRIGR QIVEALQIHR
GLRGQAARTE ALRLLDMVGI PDAPRRFDLY PHEFSGGQCQ RLMIAMALAG EPDLLVADEP
TTALDATIQA QILDLLNALR AETGMALVFI SHDLGAVSQV CERVCVMYAG RIVEEGSVAQ
LFSQPRHPYT RGLFDAIPRI DGPRDRLIPI PGTVPNPKHL PAGCSFSPRC PYAVDACGST
YPSLEFQGDG RRLACMRPVP AVTTSGEAKR RIHEGLMA
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