Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2826 |
Symbol | |
ID | 5323696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2950501 |
End bp | 2951733 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791771 |
Product | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) |
Protein accession | YP_001328491 |
Protein GI | 150398024 |
COG category | [C] Energy production and conversion |
COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGAAT TCAGCCGACT GAGCCTGCAT GTCCCCGAAC CGGCCGTCCG GCCGGGCGAT CAGCCCGACT TTTCCAATGT GAAGATTCCG AAGGCGGGCT CGGTGCCGCG GACGGAAGTC GACGTGGACC CCGAAGAGAT CCGCGACCTC GCCTATTCGA TCATCCGGGT GCTTAATCGC GAGGGCGAGG CGGTCGGACC CTGGGCAGGC CTTCTTTCGG ACGAGGAACT ACTGACCGGC CTCAGGCATA TGATGCTGCT GAGGGCCTTC GACGCGCGTA TGCTCATGGC GCAGCGCCAG GGCAAGACGT CCTTCTACAT GCAGCATCTC GGCGAAGAGG CGGTGAGCTG TGCATTCCGC AAGGCGCTCC GCAAGGGCGA CATGAATTTT CCGACCTACC GTCAGGCGGG GCTTCTGATC GCCGACGACT ACCCGATGGT CGAGATGATG AACCAGATCT TCTCGAACGA GCTCGATCCC TGCCATGGGC GGCAGTTGCC GGTCATGTAC ACCTCCAAGG CGCACGGCTT CTTCACGATA TCCGGCAACC TCGCCACGCA ATATGTCCAG GCGGTCGGCT GGGCGATGGC GTCCGCCATC AAGAACGATA CCCGGATCGC CGCCGGCTGG ATCGGCGACG GCTCGACGGC CGAGTCGGAC TTCCATTCCG CGCTGGTCTT CGCCTCCACC TACAAGGCGC CCGTCATTCT CAACATCGTC AACAATCAAT GGGCTATCTC GACCTTCCAG GGTATCGCCC GAGGGGGCTC CGGCACATTT GCGGCCCGGG GTCTGGGTTT CGGCATTCCC GCCTTGAGGG TCGACGGCAA CGACTATCTC GCGGTCTATG CGGTGGCGCG CTGGGCGGCG GAGCGGGCGC GCCTGAATCT CGGTCCGACG CTGATCGAAT ATGTGACCTA TCGCGTCGGC GCCCATTCGA CCTCCGACGA TCCGAGCGCC TATCGTCCGA AAACGGAATC GGAGGCCTGG CCGCTCGGCG ACCCGGTTCT GCGCCTCAAA AAGCACCTGG TTCTGCGCGG CGTCTGGTCC GAGGAACGGC ATGCGCAGGC GGAGGCGGAA ATCATGGACG AAGTCATCCA GGCACAGAAG GAAGCCGAGC GCCACGGAAC GCTCCATGCC GGCGGCAGGC CGTCGGTGCG GGACATCTTC GAAGGCGTCT ATGCCGAGAT GCCGCCCCAT ATCCGCCGCC AGCGGCAGAA AGCGGGGTAC TGA
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Protein sequence | MDEFSRLSLH VPEPAVRPGD QPDFSNVKIP KAGSVPRTEV DVDPEEIRDL AYSIIRVLNR EGEAVGPWAG LLSDEELLTG LRHMMLLRAF DARMLMAQRQ GKTSFYMQHL GEEAVSCAFR KALRKGDMNF PTYRQAGLLI ADDYPMVEMM NQIFSNELDP CHGRQLPVMY TSKAHGFFTI SGNLATQYVQ AVGWAMASAI KNDTRIAAGW IGDGSTAESD FHSALVFAST YKAPVILNIV NNQWAISTFQ GIARGGSGTF AARGLGFGIP ALRVDGNDYL AVYAVARWAA ERARLNLGPT LIEYVTYRVG AHSTSDDPSA YRPKTESEAW PLGDPVLRLK KHLVLRGVWS EERHAQAEAE IMDEVIQAQK EAERHGTLHA GGRPSVRDIF EGVYAEMPPH IRRQRQKAGY
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