Gene Smed_2818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2818 
Symbol 
ID5323688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2942342 
End bp2943673 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content67% 
IMG OID640791763 
Productprecorrin-3B synthase 
Protein accessionYP_001328483 
Protein GI150398016 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0155] Sulfite reductase, beta subunit (hemoprotein) 
TIGRFAM ID[TIGR02435] precorrin-3B synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.68389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCG GGGCCTGTCC TTCGCTCGCG GCACCGATGC GGACCGGGGA CGGCCTGCTC 
GTGCGGCTGC GACCAGCGGT CGACGGTCTG ACCCCGGCGG AGATAAGGGC GCTCGCCGTC
GCGGCCGGAG CCTATGGCAG CGGCATTATC GAGATCACGG CACGCGGCAA CCTGCAGATA
CGCGGCCTGA CACCGGAGAG TGTTCCGGCA CTTGCCGCGG CGATCTGGGA AACGGGAATA
GCCGTTGCCG AAGGCCTGGC AATCGAGACG CCACCCCTGG CCGGTTTCGA CCCCGGTGAA
ATCGCCGACC CTCGCCCGCT CGCCCGCGCG CTGCGCTTGG CGATCTCCGG TGCGGGTGAG
ACGCTCAGCT TTGCACCGAA ATTTACGATC GTGGTGGATG GAGGCGGGTG CTTCAATCTC
ACGATGTTGA CCGCCGATCT GCGTATTTCC GCACTTGGCG GTGAGGATGG CATTCGGTGG
CTGCTTTCGC TCGGAGGCAC CGCGCGCTCG GCAGCGCCTG TCGCCCTGCT GGAAGCGGGA
GAGGTCGTTC CCGCGGTTCT CGATATCATG CGAAGTCTCA GCGCGCTCGG GCCCGCAGCC
CGCGCTCGCG ACCTTGACGC GGGCGGCATT CGGCAGCGCT TTTCTGCCGG CAATGCATTG
CCGTTTGCCG GCGAGGGCTC CCCTTCTCCG CCGCCGGCGG GCATCCATCA CTTCGGCGGG
GCCGGCACGG TGCTCGGCGT GGGGCTGGCC TTTGCGCAGA CCGACGCGGG CAGTCTCATC
GCGTTCGTGC GGCAGGCAGA GGAACTCGGC GCAGCGGAGA TACGTCTGGT GCCGCGCCAT
GGTCTGTTCG TCCTCGGTCT CTCCGGCGAA GCGGCCGCCA TTGCGCAAGG GCTTGCCCGC
GGCCATGGAT TTCTGGTCGC CGCCGACGAT CCGCGCAATC ACATAGCGGC CTGCGCCGGT
CTTGCCTGCG CGTCGACGGG AATGGACACC AAGGCGACGG CGAGATTGTT GGTCGAAGCC
GCGCCGGACT TGCTCGACGG CTCGGCGACG GTGCATCTCT CCGGCTGCCC CAAAGGCTGC
GCCAAGCCGT CTCCAGCGCC GATGACGCTG ATCGGTGCGC CATCAGGATA TGCGCCATCA
GGATATGGAC TTGTCGTAAA TGGCACTGCT TCCGTCGCGC CGAGTGCCTA CAGGGATGAA
AACGGAATAA GATCCGCCTT CGCTGCGCTC AACGCGCTGG TGCGGGAAAA CAAAGACGCT
GGCGAATCGG CTTGGTCCTG TCTTACACGG CTCGGGACCG CGCAGATCGG CGCAGCGTTC
GAACAGGGAT AG
 
Protein sequence
MRRGACPSLA APMRTGDGLL VRLRPAVDGL TPAEIRALAV AAGAYGSGII EITARGNLQI 
RGLTPESVPA LAAAIWETGI AVAEGLAIET PPLAGFDPGE IADPRPLARA LRLAISGAGE
TLSFAPKFTI VVDGGGCFNL TMLTADLRIS ALGGEDGIRW LLSLGGTARS AAPVALLEAG
EVVPAVLDIM RSLSALGPAA RARDLDAGGI RQRFSAGNAL PFAGEGSPSP PPAGIHHFGG
AGTVLGVGLA FAQTDAGSLI AFVRQAEELG AAEIRLVPRH GLFVLGLSGE AAAIAQGLAR
GHGFLVAADD PRNHIAACAG LACASTGMDT KATARLLVEA APDLLDGSAT VHLSGCPKGC
AKPSPAPMTL IGAPSGYAPS GYGLVVNGTA SVAPSAYRDE NGIRSAFAAL NALVRENKDA
GESAWSCLTR LGTAQIGAAF EQG