Gene Smed_2809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2809 
Symbol 
ID5323679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2936243 
End bp2936728 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content61% 
IMG OID640791754 
Productcation antiporter 
Protein accessionYP_001328474 
Protein GI150398007 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID[TIGR00942] Monovalent Cation (K+ or Na+):Proton Antiporter-3 (CPA3) subfamily 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.492713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCT GGTTCCCCTA TCCGCTGCTC TCCGTCGCGC TCCTCCTCAT GTGGCTGCTT 
CTAAGTCAGT CCGTGACGCC GGGTTCGATC CTCCTCGGCC TTATCGTCAG CACCGTCCTT
GCATGGGTAA CGCTCAAACT GAAGCCTGCC CGCTCGCGTC TCAATCGCTG GAGCCGCATC
GCCGGTTTTA TTCTGCGCGC CACAGGCGAC GTTATCCGCT CGAATATCGC CGTCACGCTG
ATCATCCTGC GCGCGAGGCG CCGCGCGGTC GCCGCTGGCT TCATGACCCT CGGTATCGAC
CTCGAAGACG AGAATGCCCT GGCGCTGCTT GCCTGCGTGC TGACGGCGAC GCCGGGCACC
GCATGGCTCG AATATGACCG GCGCCAGAAG ATCTTGCTCA TCCACGTGCT CGACATCGAA
AACGAGGAAC TGTGGCGCAA AACGATCAGG CGCTACGCGG CCGATTTAAA GGAGATATTC
GAATGA
 
Protein sequence
MRTWFPYPLL SVALLLMWLL LSQSVTPGSI LLGLIVSTVL AWVTLKLKPA RSRLNRWSRI 
AGFILRATGD VIRSNIAVTL IILRARRRAV AAGFMTLGID LEDENALALL ACVLTATPGT
AWLEYDRRQK ILLIHVLDIE NEELWRKTIR RYAADLKEIF E