| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2794 |
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| Symbol | |
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| ID | 5323664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2914672 |
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| End bp | 2916261 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791739 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001328459 |
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| Protein GI | 150397992 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.574057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAA CGGCAATAGC GGGCGCTGCT GCGCCGAGCC TACCGAAAGC CGAGGAGCAT
ATGGATCCGC GGCGGCTCAT CGCCTTCTTC GCGATGGTCG TCGGCATGTT CATGGCGATC
CTCGACATCC AGATCGTCTC CGCCTCGCTC GCCGAAATCC AGGCGGGTCT TTCTGCCGGG
TCCGACGAGA TCGGCTGGGT CCAGACGTCC TACCTGATTG CGGAAGTCAT CATGATCCCG
CTCTCGGGCA CGCTGGCCCG CATCGTCTCG ACGCGGGTGC TCTTCTCCGT GGCTGCCGCC
GGTTTTACGG CAGCCAGCGC CCTTGCGGCT ACCGCCACCA ATATCGAGCA GATGATCGCC
TACCGGGCGA TCCAGGGCTT TATCGGCGGC GGCATGATCC CGTCGGTCTT TGCCGCGGCC
TTCACCATCT TCCCGCCCTC GAAGCGAAAC GTCGTCTCGC CGATCATCGG TCTCATCGCG
ACGCTGGCGC CGACCATCGG CCCGACGGTC GGCGGCTATC TCAGCCATGC CTTCTCCTGG
CACTGGCTGT TTCTCGTCAA CGTCATCCCC GGCATCATCG TCGCGACGGT TACCTGGTTC
TTCATCGACT TCGACAAGCC GGAACTCGGA TTGATCAAGA AATTCGACTG GTGGGGACTT
CTCGCCATGG CGATCTTCCT CGGCTCGCTC GAATATGTTC TGGAGGAAGG CAACGCCAAC
GACTGGTTCA ACGACGAGCA TATCGTCACG GGCGCCGTTG CCACCACGGT CGCCGCCGTC
ATTTTCTTCT ACCGGGCGTT CAAGGTCGAT TTCCCGGTTG TCGATCTCAA GGCCTTTGCC
AACCGCAACT TCGCCTTCGG CTCGCTCTTC TCCTTCGTGA TGGGGATCGG CCTCTACGGT
CTCACCTATC TCTATCCGCT CTATCTCGGG CGCATTCGCG GCTACGATTC GCTGATGATC
GGCGAGACCA TGTTCGTCTC GGGCCTCGCA ATGTTCGTCA CGGCGCCGGT CGCGGGCTTT
CTCTCCGGCC GAATGGATCC GCGGGCGATG ATGACGATCG GCTTTGCCGG TTTTGCCGCG
GGCACATGGC TGATGAGCCA GATGACTGCC GACTGGGATT TCTGGGAACT GCTCGTCCCG
CAGATCCTGC GCGGCTGCTC GCTGATGCTA TGCATGGTGC CGATCAACAA TATCGCGCTC
GGCACCCTGC CGCCGGCGCG CATCCGCAAC GCGTCGGGCC TCTACAATCT GACGCGCAAT
CTCGGAGGCG CCGTTGGGCT TGCGGTCATC AACACTATTC TCACGCAGCG CCAGGATTTT
CACTACGCAC GCCTTGCCGA ACACGTGGAA TGGGGTAATC CGGAGGCAGT TGAGCGGATG
AGAAACATCG CCTCGACGTT CACCGCGCAC GGCCTCGACG GAACCACGGC CGCGGTCAAG
CAACTGGCGG CGATGGTTCA GCAGCAGGCA GTGATCATGT CCTTCATCGA CGTGTTCGTA
TTGCTGACGG TCCTGTTCCT GTCGATGATC GCCGGCGTTC TGATGATCGC GAAACCGCAA
GCGGCGGGTC CCGGAGGTGG CGGGCACTAG
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| Protein sequence | MAATAIAGAA APSLPKAEEH MDPRRLIAFF AMVVGMFMAI LDIQIVSASL AEIQAGLSAG
SDEIGWVQTS YLIAEVIMIP LSGTLARIVS TRVLFSVAAA GFTAASALAA TATNIEQMIA
YRAIQGFIGG GMIPSVFAAA FTIFPPSKRN VVSPIIGLIA TLAPTIGPTV GGYLSHAFSW
HWLFLVNVIP GIIVATVTWF FIDFDKPELG LIKKFDWWGL LAMAIFLGSL EYVLEEGNAN
DWFNDEHIVT GAVATTVAAV IFFYRAFKVD FPVVDLKAFA NRNFAFGSLF SFVMGIGLYG
LTYLYPLYLG RIRGYDSLMI GETMFVSGLA MFVTAPVAGF LSGRMDPRAM MTIGFAGFAA
GTWLMSQMTA DWDFWELLVP QILRGCSLML CMVPINNIAL GTLPPARIRN ASGLYNLTRN
LGGAVGLAVI NTILTQRQDF HYARLAEHVE WGNPEAVERM RNIASTFTAH GLDGTTAAVK
QLAAMVQQQA VIMSFIDVFV LLTVLFLSMI AGVLMIAKPQ AAGPGGGGH
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