| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2791 |
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| Symbol | |
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| ID | 5323661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2910112 |
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| End bp | 2911566 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640791736 |
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| Product | xylulokinase |
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| Protein accession | YP_001328456 |
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| Protein GI | 150397989 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.504033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.565277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCTCG GACTGGATCT CGGCACTTCG GGAGTGAAGG CCATGCTGAT GGACGAGGAG
CAGCGGATCG TCGGCTCCGC GACCGGAGCG CTCGACGTCG ACCGCCCGCA TCCCGGCTGG
TCGGAACAGA ACCCGGCCGA CTGGATCCGA GCCGCGGAGG AGGCGATAGC TCAGCTCAAG
GCCGCGCATG CTGAAGCACT TGCCGCCGTC CGCGGGATCG GCCTCTCCGG CCAGATGCAC
GGTGCCACGC TGCTCGACGA AGGGGATGCG GTGCTGCGCC CGTGCATTCT GTGGAACGAC
ACCCGCAGCT TCCGTGAGGC GGAGGCACTC GATGGCGACC CGCAATTCCG CGCGCTGACG
GGCAATATCG TTTTCCCCGG CTTCACCGCT CCGAAACTCG CCTGGGTGCG CGAAAACGAG
CCGGAGATTT TCGCCAGAGT CCGCTGGGTC TTGCTTCCGA AGGACTATCT GCGCCTCTGG
TTGACCGGCG AGCACATGTC CGAAATGTCC GATTCCGCCG GCACCTCCTG GCTCGACACT
GGCAAGCGCA AATGGTCGAC AAGCCTGCTT GCCGCCACGC ATCTCGAGGA ACGGCAGATG
CCGGAACTTG TCGAAGGAAC CGATGCGGCC GGTACCGTGC GGCCCGAACT GGCAAGTCGC
TGGGGCATGG GCTCCGGTGT TCTTGTGGCC GGCGGAGCCG GCGACAACGC GGCATCGGCC
TGCGGCATGG GAACCGTCGG GGAGGGGCAG GCCTTTGTCT CACTCGGCAC CTCCGGCGTG
CTTTTCGCCG CAAATGCAAG CTATCTTCCC AATCCTGAAA GCGCCGTTCA CGCCTTCTGC
CATGCGCTGC CGAACACCTG GCATCAGATG GGCGTGATCC TTTCGGCGAC GGACGCCCTG
AACTGGCACT CCGGAGTTAC GGGCCGGAGT GCGGCCGACC TTACCGGTGA GCTTGGCGAG
AGCCTCAGAG CGCCGGGTTC CGCAACGTTT CTTCCCTATC TTTCCGGCGA GCGGACGCCG
CACAACGACG CGGCCATTCG CGGTGCCTTT GTCGGGCTCG GCCATGAGAG CTCCCGCCCG
CTATTGACGC AGGCGGTGCT CGAAGGCGTT TCCTTCGCGA TCCGCGACAG CCTGGAGGCT
CTGCGCGCGG CCGGCACGCA GCTTGAACGG GTCACCGCAA TCGGCGGCGG TTCGCGGTCG
CGCTACTGGC TGAAATCCAT CGCGACCGCG CTGAACCTGC CGGTCGACTT GCCCGCGGAC
GGCGATTTCG GCGCCGCCTT CGGCGCGGCG CGGCTCGGCC TGATCGCTGC CGCCGACGCC
GACCCGGTCG CGGTCTGCGC GGCGCCGGAG ACGGCGGAAA CAATCGCGCC CGAGGGACCG
CTCGTGCAGG CTTATGAAGA TGCCTATCAG CGCTATCGCC GGCTCTACCC GGCGTTAAAG
GGAGCGATGT CGTGA
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| Protein sequence | MYLGLDLGTS GVKAMLMDEE QRIVGSATGA LDVDRPHPGW SEQNPADWIR AAEEAIAQLK
AAHAEALAAV RGIGLSGQMH GATLLDEGDA VLRPCILWND TRSFREAEAL DGDPQFRALT
GNIVFPGFTA PKLAWVRENE PEIFARVRWV LLPKDYLRLW LTGEHMSEMS DSAGTSWLDT
GKRKWSTSLL AATHLEERQM PELVEGTDAA GTVRPELASR WGMGSGVLVA GGAGDNAASA
CGMGTVGEGQ AFVSLGTSGV LFAANASYLP NPESAVHAFC HALPNTWHQM GVILSATDAL
NWHSGVTGRS AADLTGELGE SLRAPGSATF LPYLSGERTP HNDAAIRGAF VGLGHESSRP
LLTQAVLEGV SFAIRDSLEA LRAAGTQLER VTAIGGGSRS RYWLKSIATA LNLPVDLPAD
GDFGAAFGAA RLGLIAAADA DPVAVCAAPE TAETIAPEGP LVQAYEDAYQ RYRRLYPALK
GAMS
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