| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2739 |
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| Symbol | |
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| ID | 5323609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2852081 |
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| End bp | 2854546 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791684 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_001328404 |
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| Protein GI | 150397937 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATC GGCTCTCCAA CACCGAACTG CCGCAACCCG CCCCCAGATC CTCGGAACCC
AGCCAGCTTG CAGTCGAAAT CCTCGAGCGC CTGAAGTATC GCATCGGCAA GGATCCGAAA
GTCGCCAAGC CGCATGACTG GCTGACGGCC GCCATTCTCG TCGCACGTGA CCGCATCACC
GACAAATGGA TGGATTCCAC CCGCAAGACC TACTCGACCG GTGCAAAGCG CGTCTATTAC
ATGTCGCTCG AGTTCCTCAT CGGCCGCATG ATGCGCGATG CGATGACGAA TCTGGGGCTT
ATGGACGAAA TGCGGGACGC CCTCGCTTCG CTTGGTGTGG ATATCGACGT GATCGCCGCG
CTCGAGCCGG ACGCGGCACT CGGCAATGGC GGTCTCGGCC GCCTCGCCGC CTGCTTCATG
GAATCGATGG CGACCGTCGA CGTGCCTGCC TATGGCTATG GCATCCGCTA CATGCACGGT
CTCTTTCGCC AGCAGATGGC CGACGGTTGG CAGGTGGAAC TGCCGGAAAC GTGGCTGGCC
CATGGCAACC CCTGGGAATT CGAACGCCGC GAATGCTCCT ACGAGATCGG CTATGGCGGC
AGCGTGGAAA CGGTCAACAT CGACGAGGAA GTGCAGCGCT ACGTTTGGAA GCCGGCTGAG
CGCGTCATCG CCACCGCCTT CGATACGCCC GCCGTCGGCT GGCGGGCGAC GCGTGTTAAC
ACGCTCCGCC TCTGGGCCGC GCAGCCGATC GACCCGATCC TGCTGGACGC CTTCAATGCG
GGCGACCATA TCGGGGCTCT GCGCGAAAGC AACAAGGCCG AAAGCCTGAC GCGCGTGCTC
TATCCGGCCG ACGCCACGCC GGCCGGCCAG GAACTCAGGC TCCGACAGGA ATATTTCTTT
TCCTCCGCCT CGCTTCAGGA CATCCTGCGC CGGCACCTGC AGCAATATCC GGATTTCACG
TCGCTTCCCG ATGCCGTTGC CATTCAGCTC AACGACACGC ATCCAGCCGT CTCCGTGGCC
GAACTCGTAC GTCTTTTGAG CGACGTCCAC GGATTGGATT TCGAGCAGTC CTGGGACATC
GCACGACGGA CCTTCTCCTA TACCAACCAC ACCCTGCTGC CTGAAGCGCT CGAGAGCTGG
CCGGTTCCGC TCTTCGAGAG GCTGCTGCCT CGCCACATGC AGATCGTCTA CGCCATCAAC
GCCAAGATTT TGATCGAAGC GCGCAGGGTG AGGTACGCGA CGGACGAGGC GATCCGCAAC
ATCTCGCTCA TCGACGAGAC GGGCGAGCGG CGCGTCCGCA TGGGCAATCT GGCCTTTGTC
GGCTCGCACT CGATCAACGG CGTATCGGCT CTGCATACCG AGCTGATGAA GGAAACTGTC
TTCGCCGATC TGCATGCGCT CTATCCGGAC CGCATCAACA ACAAGACCAA CGGCATCACG
CCGCGACGTT GGCTCATGCA GTGCAATCCG GATCTGTTCG GTCTGATCCG CGAGGCGATC
GGCGACGAAT TCATAGACAA TACCGAGGCG CTTCAGGCGC TCGACGCCTT TGCCGATAAC
GCGGATTTCC AGGAGCGTTT CGCAGCCGTC AAACGCGCCA ACAAAGTGCG GCTTGCGAAG
CTGATCCAGG CCAATCTCGG CATCCGGCTC GATCCCTCGG CGATGTTCGA CATCCAGATC
AAGCGCATCC ACGAATACAA GCGGCAGCTG CTGAACCTTA TCGAAGCCGT GGCGCTTTAC
GATCAGATCC GCTCACACCC CGAGCTCGAC TGGGTGCCGC GCGTCAAGCT CTTCGCCGGA
AAAGCGGCGC CAAGCTACCA CAACGCCAAG CTGATCATAA AACTTGCCAA TGACATCGCC
CGCGTCATCA ACAACGATCC GGCGGTCCGC GGGCTCCTGA AAGTCGTCTT CATCCCGAAC
TACAACGTTT CGCTTGCGGA GGTGATGGTC CCGGCGGCCG ACCTTTCGGA GCAGATATCG
ACGGCCGGCA TGGAAGCGTC GGGCACCGGA AACATGAAGT TCGCCCTGAA CGGAGCGCTG
ACCATCGGCA CGCTCGACGG GGCTAATGTC GAGATGCGAG ACTGGGTCGG AGAGGAGAAC
ATCCAGATCT TCGGCATGAC TGCCGAGGAC GTGGGCAAGG CGCGGGCCGA AGGGCACAAT
CCGCGCGCCA TCATCGAAAA TTCGCGTGAA CTCTCGCAAG CGCTCTCGGC GATCGCGTCA
GGCGTCTTCT CCCCCGATGA TCGAAATCGC TTCTCGGGCC TCGTCGACGG ACTCTATAAC
CACGACTGGT TCATGGTTGC GGCCGATTTC GAAGCCTACG CCAAGGCGCA GCGCGAAATC
GACCAGCTCT GGACCAAGCC AGCCGCCTGG TATTCGAAGG CGGTCCGCAA TACCGCCCGG
ATGGGCTGGT TCTCATCCGA TCGAACGATC CGGCAATATG CCGGAGAGAT CTGGAGAGCC
GGATGA
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| Protein sequence | MMNRLSNTEL PQPAPRSSEP SQLAVEILER LKYRIGKDPK VAKPHDWLTA AILVARDRIT
DKWMDSTRKT YSTGAKRVYY MSLEFLIGRM MRDAMTNLGL MDEMRDALAS LGVDIDVIAA
LEPDAALGNG GLGRLAACFM ESMATVDVPA YGYGIRYMHG LFRQQMADGW QVELPETWLA
HGNPWEFERR ECSYEIGYGG SVETVNIDEE VQRYVWKPAE RVIATAFDTP AVGWRATRVN
TLRLWAAQPI DPILLDAFNA GDHIGALRES NKAESLTRVL YPADATPAGQ ELRLRQEYFF
SSASLQDILR RHLQQYPDFT SLPDAVAIQL NDTHPAVSVA ELVRLLSDVH GLDFEQSWDI
ARRTFSYTNH TLLPEALESW PVPLFERLLP RHMQIVYAIN AKILIEARRV RYATDEAIRN
ISLIDETGER RVRMGNLAFV GSHSINGVSA LHTELMKETV FADLHALYPD RINNKTNGIT
PRRWLMQCNP DLFGLIREAI GDEFIDNTEA LQALDAFADN ADFQERFAAV KRANKVRLAK
LIQANLGIRL DPSAMFDIQI KRIHEYKRQL LNLIEAVALY DQIRSHPELD WVPRVKLFAG
KAAPSYHNAK LIIKLANDIA RVINNDPAVR GLLKVVFIPN YNVSLAEVMV PAADLSEQIS
TAGMEASGTG NMKFALNGAL TIGTLDGANV EMRDWVGEEN IQIFGMTAED VGKARAEGHN
PRAIIENSRE LSQALSAIAS GVFSPDDRNR FSGLVDGLYN HDWFMVAADF EAYAKAQREI
DQLWTKPAAW YSKAVRNTAR MGWFSSDRTI RQYAGEIWRA G
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