Gene Smed_2712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2712 
Symbol 
ID5323581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2826338 
End bp2827384 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content64% 
IMG OID640791656 
Productthreonine aldolase 
Protein accessionYP_001328377 
Protein GI150397910 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTCT CCTCCGACAA CTGGGCCGGC GCCCATCCGG CGATTGCCGA GAGTCTGGTG 
ACGCATGCGG CAGGCTATGC GTCCGCCTAT GGCACGAGCG AACTCGACCG GACGGTCGAG
AAGAAATTTT CGGAGATTTT CGAAAAGGAC GTTGCGGTAT TTTTCGTCGG CACCGGAACT
GCCGCGAACG CTCTTGCGCT TTCGAGCGCC AATCGGGCGG GCGGCATCGC TTTTTGCCAC
CGCGAGGCGC ATGTAAACGT CGATGAGTGC GGCGCGCCGT CATTCTTCTC GCATGGTGCA
AGACTCTGCC CGGTCGGGGG CGAGCGCGGC AGAATGGATC CGGCGAAACT CGAGGCCGGG
ATCCGCCGGT TCCCGAAGGA GAACGTCCAT GGCGGGCAGC CGATGGCGGT GACTCTCACG
CAGGCAACCG AGAGCGGCAC CGTCTATCCG CTCGACCAGA TCGAGTCGAT CGGCTCCGTC
GCCACAGCCC ACGAACTGCC GCTGCACATG GATGGCGCTC GCTTCGCCAA CGCCCTGGTC
AGCCTCGGAA CGACACCCGC CGAGATGACC TGGAAACGCG GCGTCGACCT CCTCTCCTTC
GGAGGCACCA AAAACGGTTG CTGGTGCGCC GAAGCGCTGG TCCTCTTCGA TCGGTCCAGG
GCGCAGCAGA TGCATTTCCT GCGCAAGCGA TCGGCCCAGC TTTTCTCCAA ATCGCGCTTC
GTGGCCGCCC AGTTCGACGC ATATCTCACC GGAGATCTCT GGCTCGATCT CGCCCGTCAA
GCCAACGCAA TGGCGCGGCG CCTCGCCGAC GGCATCACTG CCTCGGCGGA GAGCCGGCTT
GCCTGGACGC CGGATGCCAA CGAGGTCTTC GTCGTGCTGA AACGAGAGGC GGCGAGCCGG
CTGCGGGAGC AGGGCGCCCT TTTTTACGAT TGGGACGTGC CGCACGATCT CGAGGGCAGC
CTGGCGGACA ATGAAGGGCT CTATCGCCTC GTCACCAGCT TTGCGACGCG CGCCGAGGAT
GTCGACCGCT TCGTCGCCGC CTGCTGA
 
Protein sequence
MIFSSDNWAG AHPAIAESLV THAAGYASAY GTSELDRTVE KKFSEIFEKD VAVFFVGTGT 
AANALALSSA NRAGGIAFCH REAHVNVDEC GAPSFFSHGA RLCPVGGERG RMDPAKLEAG
IRRFPKENVH GGQPMAVTLT QATESGTVYP LDQIESIGSV ATAHELPLHM DGARFANALV
SLGTTPAEMT WKRGVDLLSF GGTKNGCWCA EALVLFDRSR AQQMHFLRKR SAQLFSKSRF
VAAQFDAYLT GDLWLDLARQ ANAMARRLAD GITASAESRL AWTPDANEVF VVLKREAASR
LREQGALFYD WDVPHDLEGS LADNEGLYRL VTSFATRAED VDRFVAAC