Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2697 |
Symbol | |
ID | 5323566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2804060 |
End bp | 2804941 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791641 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001328362 |
Protein GI | 150397895 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAGA GCGCTCTCGC CCGCACGCTG CGCACCATTG CCGGTTGGCT CGTCGTCGGG GCATTCTTTT TCCCGATCTA CTTCTGGACC TCGGTCGCCT TCCGCGACGC CAAGGACATT TTCAACTGGC CGCCGATCTT CTTCAATTTC CAGCCGACGG TGAGGAATTT CGAGCAGGTC TTCGGCATCT CGCTGGGCTT CGGTTACGGC AGCCAGGAAG CCGTGACGCC CGGCGGCGGC AACTTCTACA TGGGGCCGCG CCTTTGGGAC TCGATCGTCG TCGCATCTTT GTCGACGGTG CTGGCGATCG TGGTTGCGAC GCTTGCTTCC TATGCTTTGT CGCGCATGCA TTTCCGCGGC CGCCATGAAT TCGTCAACTG GGTGCTGTCG ACCCGCATGA TGCCGCCAGT AGCGGTGGCG ATCCCGATGT TCTTCATCTT CAAGCAGTTC AACCTGCTCG ACACCTATGT CGGCGTCATA CTCGTGCATG GTCTCATGAA CCTGCCTCTG GCGGTGCTGC TCCTGAAGAG CTTCTTCGAC GACATCCCCG CGGAGATCGA CGAGAGCGCG CTGCTCGACG GCGCGTCGCG CTGGACGATC TTCCGCCGCA TCGTGCTGCC GATGGCCAAG GGCGGCATAG CCGCTACCGC GGTGCTCTGC TTTATCTTCT CATGGACGGA GTTCCTCTTC GTCCTGACCT TGACGCAGAC GGGTCTGAAG ACCGTGCCCG TCGTGTCGTC GACCTTCGTC ACATCGATCG GAACCGCCTG GGGCAACATG GCCGCCCTCG GTGCGGCGGC GATCGTGCCC GCCTTCATCG TGGTCCTGCT CGTTCAACGC CATCTCGTGC GTGGTCTGAC GATGGGGTCT CTGAAGCAGT GA
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Protein sequence | MQQSALARTL RTIAGWLVVG AFFFPIYFWT SVAFRDAKDI FNWPPIFFNF QPTVRNFEQV FGISLGFGYG SQEAVTPGGG NFYMGPRLWD SIVVASLSTV LAIVVATLAS YALSRMHFRG RHEFVNWVLS TRMMPPVAVA IPMFFIFKQF NLLDTYVGVI LVHGLMNLPL AVLLLKSFFD DIPAEIDESA LLDGASRWTI FRRIVLPMAK GGIAATAVLC FIFSWTEFLF VLTLTQTGLK TVPVVSSTFV TSIGTAWGNM AALGAAAIVP AFIVVLLVQR HLVRGLTMGS LKQ
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