Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2658 |
Symbol | |
ID | 5323527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2762955 |
End bp | 2764256 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791602 |
Product | major facilitator transporter |
Protein accession | YP_001328323 |
Protein GI | 150397856 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAATA ACCTGCTTCC CGTTGCCGCT CTGCTTCTCG GCACATTGTT TCTCTTTCTC GGAAACGGTC TGCAGGGCCT GCTCCTGCCG GTGCGCGGCA CGGCGGAAGG CTATCCGACG ACGATACTCG GTCTGTTCGG CACGCTGTGG GCAACCGGTT TCGTGCTCGG CTGCTTTTTT GCGCCGAACA TCGTCAAGCG TATTGGGCAC GTGCGCGCCT TCAGCGTGTT CACCGCCCTG ATCGCTATCG TTTCGTTGTT GACGGGTATT CTGATCGATC CGATCTGGTG GTTGGCGCTC CGCGCAGTCA CAGGCTTCTC CACTGCCGGA ACTTCGATGA TCATCGAAAG CTGGCTGAAC GAGCGCGCCA CCAATGAGAG CCGCGGCCTG ATCTTCTCGC TCTACATCGC CATCACCCTT TTCGGCGTCG TCGGCGGGCA GATGATGATT CCGTTCGGCG AGACCTCCAC GACTTTCTTC TTTATGATCT GCGGCATTCT CTATTGCGTC GCGATGCTGC CGACGCTCAT GTCCAGGGCC GCGTCGCCGC AGCCGCTGAA GCAGGTCCGC CTCGATCTGC GCGGTCTCTA CAGCAATTCC CCGGTCTCCT TTCTCGGCAT CCTGCTCATC GGCATCGCCA ACGGCGCCTT CGGCACGCTG GGTGCCGTTT TCGGCCGGCA GGCGGGCCTG TCGGACAGCA CCGTCGCTGC GATGATGAGC GTCGCGATCT TCTCGGGCGC CGTCATGCAA CTGCCGGCCG GCCGCATCTC CGACCGCGTC GACCGCCGCT ATGTGCTCGC CGCGCTCGCC GGGATCGGCG CGCTCGCCGG CCTGCTGATG TTTCTCGTCG AGCCGAGCCA GGTCTGGATC GTTCTGACCC TGATCGCAAT CTACGGGGCG GCCGCCAATG CGCTCTATCC GATCGCTGTT TCCCACGCCA ACGACTTCGC CACAGCCGAG GATTTCGTGA AGGTTTCGGG CGGGCTCCTG CTTCTTTACG GAGTCGGCAC GATCATCGGG CCGACGATCG GCGGACCGAT AATGACCGCC AGCGGGCCCT ATGGCCTCTT CATGATCACG GCGTGTGCGC ATATGCTGAT CACTGCCTAT GCGATCGTCC GCAGTCGCCG GCGCGCACCG GTTCCCGCGG CCGATCGGGA AAACTTCTCG CCGGTCAATG CCGGAACCGC GACGACGCCG GAGAGCCTGC AGCTCTCGCC GCGCGCAGCT CCGATGGAGG AACTGGCGGA GGAAGGCGCC GGCGATCCCC AGGAGGAGGA GAAATCGAAT GAGCCTGTTT GA
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Protein sequence | MRNNLLPVAA LLLGTLFLFL GNGLQGLLLP VRGTAEGYPT TILGLFGTLW ATGFVLGCFF APNIVKRIGH VRAFSVFTAL IAIVSLLTGI LIDPIWWLAL RAVTGFSTAG TSMIIESWLN ERATNESRGL IFSLYIAITL FGVVGGQMMI PFGETSTTFF FMICGILYCV AMLPTLMSRA ASPQPLKQVR LDLRGLYSNS PVSFLGILLI GIANGAFGTL GAVFGRQAGL SDSTVAAMMS VAIFSGAVMQ LPAGRISDRV DRRYVLAALA GIGALAGLLM FLVEPSQVWI VLTLIAIYGA AANALYPIAV SHANDFATAE DFVKVSGGLL LLYGVGTIIG PTIGGPIMTA SGPYGLFMIT ACAHMLITAY AIVRSRRRAP VPAADRENFS PVNAGTATTP ESLQLSPRAA PMEELAEEGA GDPQEEEKSN EPV
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