| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2651 |
|---|
| Symbol | |
|---|
| ID | 5323520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2755196 |
|---|
| End bp | 2756206 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640791595 |
|---|
| Product | glyceraldehyde-3-phosphate dehydrogenase, type I |
|---|
| Protein accession | YP_001328316 |
|---|
| Protein GI | 150397849 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTCA AAGTCGCCAT CAACGGTTTC GGCCGCATCG GCCGCAACAT TCTCCGCGCC
ATCGTCGAAT CCGGCCGCAC GGACATCGAA GTCGTTGCCA TCAACGATCT GGGCCCGGTC
GAGACAAACG CTCACCTGCT GCGCTTCGAT TCCATCCACG GCCGCTTCCC GGCCGACGTG
AAGGTCGAAG GCGACTCTAT CATCATCAAC AACGGTAAGC CGATCAAGGT GACCGCGGTC
CGCAATCCGG CGGAACTGCC GCACAAGGAG CTCGGCGTCG ACATCGCGAT GGAATGCACC
GGCATCTTCA CCGCCCGCGA CAAGGCCGCC GCTCACCTGG AAGCCGGCGC CAAGCGCGTC
ATCGTCTCGG CTCCGGCCGA CGGCGCGGAT CTGACGGTTG TCTACGGCGT CAACCACGAC
AAGCTGACGA AGGATCATCT CGTCATCTCC AACGCATCCT GCACGACCAA CTGCCTGGTC
CCGGTCGCCA AGGTGCTCCA CGACGCGATT GGCATCGATC ATGGCATGAT GACCACGATC
CACTCCTATA CCAACGACCA GCCGTCGCTC GACCAGATGC ACAAGGATCT CTACCGCGCC
CGCGCCGCGG CGCTCTCTAT GATCCCGACC TCGACGGGTG CGGCCAAGGC GGTCGGCCTC
GTTCTGCCGG AACTCAAGGG CAAGCTCGAC GGTATCTCCG TACGCGTCCC GACCCCGAAC
GTCTCGGTCG TCGACCTGAA GTTCGTCGCC AAGCGCGAAA CCACGAAGGA AGAGGTCAAC
GCCGCCATCA AGGCTGCCGC CGACGGACCG CTCAAGGGCG TTCTCGGCTA TACGCTGCAG
CCGAACGTTT CGATCGACTT CAACCATGAC CCGCATTCTT CGGTCTTCCA CATGGACCAG
ACCAAGGTGA TGGAGGGCAA GTTCGTTTCG ATTCTGTCCT GGTACGACAA TGAGTGGGGC
TTCTCGAACC GTATGTCGGA TACGGCGGTC GCCCTCGGCA AGCTCCTCTA A
|
|---|
| Protein sequence | MRVKVAINGF GRIGRNILRA IVESGRTDIE VVAINDLGPV ETNAHLLRFD SIHGRFPADV
KVEGDSIIIN NGKPIKVTAV RNPAELPHKE LGVDIAMECT GIFTARDKAA AHLEAGAKRV
IVSAPADGAD LTVVYGVNHD KLTKDHLVIS NASCTTNCLV PVAKVLHDAI GIDHGMMTTI
HSYTNDQPSL DQMHKDLYRA RAAALSMIPT STGAAKAVGL VLPELKGKLD GISVRVPTPN
VSVVDLKFVA KRETTKEEVN AAIKAAADGP LKGVLGYTLQ PNVSIDFNHD PHSSVFHMDQ
TKVMEGKFVS ILSWYDNEWG FSNRMSDTAV ALGKLL
|
|---|
| |