| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2627 |
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| Symbol | tolB |
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| ID | 5323496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2727533 |
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| End bp | 2728843 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791571 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001328292 |
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| Protein GI | 150397825 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATGC TGAGACGCAA TTTTTTCCGC CTTCTGATGG TGCTGGTCGC AGGCTGCGGG
CTCATTGCCT CGCCGGCAAA GGCGCTCGTC GAGATCGACA TCAACAAAGG TAACGTCGAG
CCGCTGCCGA TCGCGATCAC GGATTTCGTG CAGGGCGAGC TTGCGCAGAA GATATCCGAC
GTCATTGCCG CCGATCTGAA GCGCTCCGGG CTTTTCGCTC CCATCAACAA GGGCGCGTTC
ATCGAGAAGG TCTCCAATCC CGATGCCACT CCGCGCTTCG AGGACTGGAA GGTCATCAAC
GCGCAGGCGC TCGTCATTGG TCGCGTCACA AAAGAAGGCG ACGGCAGGCT GAAGGCGGAG
TTCCGCCTCT GGGATACCTT CGCCGGAACG CAGATGCTGG GTCAGCAGTT CTACACCCAG
CCGGAAAACT GGCGCCGGGT CGCCCACATC ATCGCCGATG CGATCTATGA AAGGATCACG
GGCGAGAAGG GCTATTTTGA CACGCGCATC GTCTATGTCG CCGAAAGTGG TCCGAAAAAT
GCGCGCCAGC GCCAGCTGGC CATCATGGAC CAGGACGGGG CCAATTCCCG CGCGCTCACC
AATTCCAATG ACATCGTGTT GACGCCGCGC TTCTCGCCGA ACCGCCAGGA AATCACCTAT
ATGTCGTTCG AGAACCAGCA GCCACGGGTC TATCTGCTGC AGCTGGAAAC GGGGCAGCGC
GAGGTGGTCG GCAACTTCCC GGGCATGACC TTCGCTCCAC GCTTTTCGCC GGACGGCCAG
CGGGTGATCA TGAGCCTGCA GCAGGAAGGC AACGCCAATA TCTATACGAT GGACCTGCGC
TCGCGCACGA CGACGCGGCT CACCAACACC GCGGCGATCG ACACCTCGCC GTCCTATTCG
CCGGACGGAA GCCGGGTCGT TTTCGAAAGT GATCGCGGCG GCAGGCAGCA GCTCTATGTC
ATGGGTGCCG ATGGCTCGGG CCAGACGCGC ATCTCCTTCG GCGACGGTTC CTATTCGACG
CCGGTCTGGT CCCCGCGCGG CGATCTCATC GCCTTCACCA AGCAGTCGGG TGGGAAGTTC
TCGATCGGTG TCATGAAACC GGACGGCTCG GGTGAGCGTA TCCTCACGAC AGGCTTCCAT
AATGAAGGTC CCACCTGGGC GCCGAACGGC CGCGTGCTGA TGTTCTTCCG CCAGAACGCC
GGCGCAGGCG GCCCACAGCT CTATTCGATC GACCTGACGG GCTATAACGA GCAGCTTGTC
CCGACCCAGG GCTTCGCCTC GGACCCGGCC TGGTCGCCGC TCATGGAGTA G
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| Protein sequence | MEMLRRNFFR LLMVLVAGCG LIASPAKALV EIDINKGNVE PLPIAITDFV QGELAQKISD
VIAADLKRSG LFAPINKGAF IEKVSNPDAT PRFEDWKVIN AQALVIGRVT KEGDGRLKAE
FRLWDTFAGT QMLGQQFYTQ PENWRRVAHI IADAIYERIT GEKGYFDTRI VYVAESGPKN
ARQRQLAIMD QDGANSRALT NSNDIVLTPR FSPNRQEITY MSFENQQPRV YLLQLETGQR
EVVGNFPGMT FAPRFSPDGQ RVIMSLQQEG NANIYTMDLR SRTTTRLTNT AAIDTSPSYS
PDGSRVVFES DRGGRQQLYV MGADGSGQTR ISFGDGSYST PVWSPRGDLI AFTKQSGGKF
SIGVMKPDGS GERILTTGFH NEGPTWAPNG RVLMFFRQNA GAGGPQLYSI DLTGYNEQLV
PTQGFASDPA WSPLME
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