| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2621 |
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| Symbol | |
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| ID | 5323490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2719134 |
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| End bp | 2719961 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640791565 |
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| Product | porin opacity type |
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| Protein accession | YP_001328286 |
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| Protein GI | 150397819 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.120074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA TTTTCAGGGG CGTTGCCGCG GCTCTGCTAA GCGGCACGCC GGTATATGCG
GCGGACGTCT ATCAGCCGCC GGTGGAAGCA CCTTTCGTCG AGCAGCCGGT GGAGGTCGTG
CAAAGCAGCG GCTGGTATCT GCGCGGCGAC GTCGGATATG CTTGGAATGA TCTGCGCGGA
GCGCACTATT TTCAAGGCTC GAACAGCAAC CTGGTCGATT TCGACAGGGC CGATGTCGAT
GATTCCTACG TGCTCGGTGG GGGTGTCGGA TACCAGATCA ACAACTATCT GCGCGCCGAC
CTCACGCTCG ATTATCTCGG CGAGTCCGAC TTCAACGGTT CTACCACGGG CGGTTGCGGG
GTTGCGGTCA ATTGCGTCTC GAACGATGTC GCATCGATGT CCGCCTGGAG CCTGCTCGCC
AATGCCTATG TTGACATCGG CACCTACGGC GCCTTTACCC CCTATGTCGG TGCCGGTATC
GGTGGCACCA GGGTAAAGTG GGGAACGCTG CGCAACACCA GTTGCGATGT TACCGATCCG
AGCAACTGCG ACCCCACGGT CGAGCATAAG GGCGAAAGCG ATTGGCGCTT CACCTATGCG
CTGATGGCCG GTACCGCGGT GGATCTCACC TGCAATCTCA AGGCCGATGT CGGTTACCGC
TTCCGCCACA TCAATGGCGG CGACATGTTC GGGTACAATC TGAACAGCGG TCCGGCCTAT
GACAAAGACA TCTATGTTCA CGAGGCGCGG GCCGGCCTGC GCTATTCTTT CGGCAACAAT
TGCGAGGCGG CCTATGTACC GCCGGCGGAG CCGATCGTTT ACAAGTGA
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| Protein sequence | MKKIFRGVAA ALLSGTPVYA ADVYQPPVEA PFVEQPVEVV QSSGWYLRGD VGYAWNDLRG
AHYFQGSNSN LVDFDRADVD DSYVLGGGVG YQINNYLRAD LTLDYLGESD FNGSTTGGCG
VAVNCVSNDV ASMSAWSLLA NAYVDIGTYG AFTPYVGAGI GGTRVKWGTL RNTSCDVTDP
SNCDPTVEHK GESDWRFTYA LMAGTAVDLT CNLKADVGYR FRHINGGDMF GYNLNSGPAY
DKDIYVHEAR AGLRYSFGNN CEAAYVPPAE PIVYK
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