Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2599 |
Symbol | |
ID | 5323467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2695628 |
End bp | 2696659 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640791542 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001328264 |
Protein GI | 150397797 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTCG TGAGTGACAA ACTTCAGGGT GATATGGACA AAACGAAGGA TATTCACGAA GTCGGCATCG TTGGCTACAA GGGGGCTCAG GCTGCCGCGG TGCTTGGAAT GACCGATCTT CTGACCGCCG CAGACGGCTT TGCACGTAAA ATGCATGCCA TTGATCACCC CCTACTTCGC GTGAGTCACT GGACACGCGA AGATGGGCGG GCTGCGCCTG AGCGGCTGTT CGATTCCGAC CCTGGCATAG GTGGCAGCAG GCCAACCGTC ATCGTCATCC CTCCAGGGCT TGGCGATCCG CTCCCCGAGC ACGAAGCGAA ATTCTACGCC GACTGGCTTC TTTCAGAACA TTCGAGAGGA GCAGCTTTGT GCTCGATCTG CAAAGGAGCC TTCCTGTTGG GAGAGACCGG GCTTCTTGCG GGCCGGACAG TGACCACTCA CTGGACCTAT GAGGAGCAGC TTGCCTCTCG ATTTCCCGAC ATCAAGGTGA ACACCGACCG TCTGATCATA GACGATGGCG ACATACTCAC GGCCGGCGGC GTGATGGCAT GGATCGATCT CAGTCTGATT CTGATCGAGC GTTTTCTCGG CCCGAACATC ATGGTGGAAA CAGCAGGAGC TTTCCTGGTT GATCCACCGG GACGCAAACA AAGTTACTAC AGGGGCTTCT CGCCACGTCT CAATCATGGT GACGATTCGA TCTTGAAGGT TCAGCACTGG CTTCAACTCA CCGGCGGGAA AGAGATGAGA CTTGCGGCCC TCGCGGAGCA GGCAGGCCTT GAACCGCGTA CCTTTATGCG GCGATTCCAG AAAGCAACCG GCCATACGGC AGGCGAATAT GTTCAACGTC TGCGTATCAA CCGGGCACGT GACCTGCTCC AGCTGACACG CGATCCCATC GATTCAATCG CCTGGGATGT TCACTACAGC GATCCCAGCG CCTTTCGACG AATCTTCACG CGGATCATCG GTCTGAGCCC AACTGAGTAT CGCCGAAGAT TTCGCGCAGG GCCGAACGGA AATGGGACTT GA
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Protein sequence | MSVVSDKLQG DMDKTKDIHE VGIVGYKGAQ AAAVLGMTDL LTAADGFARK MHAIDHPLLR VSHWTREDGR AAPERLFDSD PGIGGSRPTV IVIPPGLGDP LPEHEAKFYA DWLLSEHSRG AALCSICKGA FLLGETGLLA GRTVTTHWTY EEQLASRFPD IKVNTDRLII DDGDILTAGG VMAWIDLSLI LIERFLGPNI MVETAGAFLV DPPGRKQSYY RGFSPRLNHG DDSILKVQHW LQLTGGKEMR LAALAEQAGL EPRTFMRRFQ KATGHTAGEY VQRLRINRAR DLLQLTRDPI DSIAWDVHYS DPSAFRRIFT RIIGLSPTEY RRRFRAGPNG NGT
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