| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2583 |
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| Symbol | |
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| ID | 5323451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2684111 |
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| End bp | 2685145 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640791526 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001328248 |
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| Protein GI | 150397781 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.201596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCA GCACAATGAA ACTCACCGTC GCGGCAGCCG GCCTGATGCT GGCGGCATCC
GCCGGCGGCG CCAATGCTTC CTATTGCGGC GATGGCAAGA CCGTAACCTT CGCCGGCATA
GATTGGGAAA GCGGCGCCTT CATTACCGAG GTCATGAAAA CGATCCTTTC CAAGGGATAC
GACTGCCAGG TCGACTCGAT TCCCGGCAAT TCCGTAACTC TCGAGCAGGC AACGGCCAAT
AACGACGTTC AGATTTTCGC CGAGGAATGG CTCGGCCGTT CGGACATCTG GAACAAGGCG
GTGGAAGAGA AGAAGGTGGT TGCCGTCGGC AAGACCTTTG TAGGCGCCAG CGAAGGCTGG
TTCGTGCCGG ACTATGTCGT CAAGGGCGAT CCCGCTCGCA ATATCGAACC CAAGGCGCCG
GACCTGAAAA GCGTATCCCA ACTTGCCGAC CCGAAAATCG CCGAGATCTT CGCTGATCCG
GAGGAACCGT CCAAGGGCCG CTTCCTGAAC TGCCCTTCCG GCTGGACCTG CGAGGGCGTG
AGCACGGCCA AGCTCGAGGC CTACAAGCTT GGCGAGTCCT ACGTGAACTT CCGCCCGGGG
ACGGGAACGG CGCTCGATGC GGCGATTACC TCTGCCTATC TCCAGGGAGA GCCGATCCTC
TTCTATTATT GGTCGCCGAC CGCGATCATG GGTAAATACA AGCTGATCCA GCTCGAAGAG
CCGCCCTATA ACGAAGCCTG CTGGAAAGAA CTGAGCAGTG CCAACGGCAA GCGTGACGAA
GGCTGCGCCT TTCCCTCCGT CGACGTCTCT TATGGCGTGA ACAGCACCTT CGCTTCCGAG
GCGCCGGAAA TCATCGAGAT CCTGGAAAAG GCAACTTTTC CGCTCGAGGA GGTCAATGCC
AGCCTCGCCT ATATGACGGA TAATAAGGTC GATGCGACGG CAGCCGCCGC GCAGTTCCTG
AAAGCCAAGG GCGACATCTG GGGCAAGTGG GTCTCGGACG AGGCACGCGG CAAAATCGAA
GCTGGCCTCG AATAA
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| Protein sequence | MSISTMKLTV AAAGLMLAAS AGGANASYCG DGKTVTFAGI DWESGAFITE VMKTILSKGY
DCQVDSIPGN SVTLEQATAN NDVQIFAEEW LGRSDIWNKA VEEKKVVAVG KTFVGASEGW
FVPDYVVKGD PARNIEPKAP DLKSVSQLAD PKIAEIFADP EEPSKGRFLN CPSGWTCEGV
STAKLEAYKL GESYVNFRPG TGTALDAAIT SAYLQGEPIL FYYWSPTAIM GKYKLIQLEE
PPYNEACWKE LSSANGKRDE GCAFPSVDVS YGVNSTFASE APEIIEILEK ATFPLEEVNA
SLAYMTDNKV DATAAAAQFL KAKGDIWGKW VSDEARGKIE AGLE
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