| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2579 |
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| Symbol | |
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| ID | 5323447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2677799 |
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| End bp | 2678809 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791522 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001328244 |
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| Protein GI | 150397777 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.171917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.200935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG GAATCTCGGC ACTCTTTGCA GCGGCGCTTC TTGCCGGCAC CGCAACGCAG
GCCGCGACCC TCGACGTCGT CAAGCAGCGC GGTGAGTTGC GTTGCGGCGT GAGCCAGGGC
GTGCTCGGCT TCTCTGCCCC TGATGACAAG GGCGAGTGGT CCGGCTTCGA TATCGACTTC
TGCCGCGCGG TCGCGGCCGC CGCCCTCGGC GACGCGGACC AGGTAAAATA TGTGCCGCTT
TCGACCAAGG AACGCTTTAC TGCCCTGCAG TCCGGCGAGG TCGATCTGCT GTCGCGCCAG
ACCACCTGGA CGCTGTCGCG CGATACGGAT CTCGGCATGA GCTTCGTCGG CGTGACCTAT
TACGACGGCC AGGCCTTCAT GGTGCGCGAC GATATCGGCG TCAAAAGCGT CAAGGAGCTC
TCCGGCGCTT CCGTCTGCAC CGAGACCGGC ACCACGACCG AGCAGAATAT GGCGGACTAT
TTCAGCGCCA ACAAGATCGA GTACAAGGTC ATCGCCTTCG AAAAGGCCGA CCAAACGATC
CAGGCCTTCA ACGCCGGCCG CTGCGACGTC TATTCCACCG ACGCCTCCGC GCTCTATTCC
CAGCGGATGA CGCTCAACGA TCCCGACCGC TTCGTCGTCC TGCCGGAGGT CATCTCCAAG
GAGCCGCTCG GCCCTGCCGT CCGGCAAGGC GACGACCAGT GGTTCAAAGT GGTTCGCTGG
ACACTCTTCG CGATGGTAGA AGCGGAGGAA CTGGGTATCA CCCTGGAGTC GGCCGCGTCG
CTTCTTGAAA GCGGGACCGT CGCGCAAAAA CGCTTTCTCG GCGTCGACAA CGAAGCCGGC
AGGGCGCTCG GCCTCAATCC GGATTGGGCT TATCAGGTGG TCTCGGCCGT CGGCAATTAC
GGCGAGATCT TCGAGCGTCA CCTCGGCCAG GCGAGCGCGC TGAAGATCGA TCGCGGCCTC
AACAAGCTCT GGAACGCCGG TGGCCTGATT TACGCTCCGC CGGTCCGCTG A
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| Protein sequence | MKTGISALFA AALLAGTATQ AATLDVVKQR GELRCGVSQG VLGFSAPDDK GEWSGFDIDF
CRAVAAAALG DADQVKYVPL STKERFTALQ SGEVDLLSRQ TTWTLSRDTD LGMSFVGVTY
YDGQAFMVRD DIGVKSVKEL SGASVCTETG TTTEQNMADY FSANKIEYKV IAFEKADQTI
QAFNAGRCDV YSTDASALYS QRMTLNDPDR FVVLPEVISK EPLGPAVRQG DDQWFKVVRW
TLFAMVEAEE LGITLESAAS LLESGTVAQK RFLGVDNEAG RALGLNPDWA YQVVSAVGNY
GEIFERHLGQ ASALKIDRGL NKLWNAGGLI YAPPVR
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