| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2572 |
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| Symbol | |
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| ID | 5323440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2668810 |
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| End bp | 2669940 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791515 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001328237 |
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| Protein GI | 150397770 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0354157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.34011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGATAA CAGGATTGTC GGTAGGTGAC AGGCTAGGCA GGATGGGCAC GCTTGCAGGC
GCTTGCGCGA TCTTTTTGGC TGCGGTGCTT CCCGCTTCTG CCAATCCGCG GCTCGTGATC
GACGTCGATA CGCTCAAGGT CTACGAGCAT CAGGACATTT TCCAGAAGTG GTATCCGGCG
TCGCTGACCA AGCTGATGAC AGCCTATATC ACGTTCAGAG CGATCAAGGC GGACCAACTG
ACGCTGGAGA GCCCGGTCGT GATGACGAAG AACGCCGCTT CCGAGCCGCC GAGCAAGATG
TTCTACAAGC CTGGCCAGAA GATGACGCTC GACAGCGCAT TGAAGATGAT GCTGGTCAAG
TCGGCAAACG ACGTCGCCGT TGCGATCGCC GAGACGGTCG GCGGAACCGA GCAGGCCTTC
ATCGAGAGGA TGAACGCCGA GGCCCGCCGC ATCGGAATGA CGTCGTCGCG GTTCATCAAT
CCCCACGGCC TTCCCGGCGA AGGGCAATAT ACGACGGCCC GGGACCTTGC GGTCCTCGCT
GTCACGCTGA AGCGCGAATT CCCGCAATAT GCCTCCTATT TCGCGCTGGA AGGCTTCACC
ACCGGGAAGA AGGATTATCC CAACTACAAC ATGCTGATCG GCCGTTTCGA GGGTGCCGAC
GGCATGAAGA CGGGGTTCAT CTGCGCTTCG GGGTTCAATC AGGTCTCCTC GGCGGTCCGC
TCCGGACGCC GGGTGGTCTC GGTCGTGCTT GGCGAAGACA GTCTTGGAGC GCGCGCCGAC
GAGTCGGCCC GGCTCCTGCA GAAGGCATTG ACGACGGTGG CCACGGACAA GCCTTCGCTT
GCGGAGATTC CGCCTTACGG CGAGAGCCGC GAAGTCGTTG CCGACGTCAG CAGGGAGATC
TGCTCCAAGC AGGCAGCGAA GGTGCGCAGC GAGGGCCGCG ACGAAGCGGG CCGGCAGAAA
CTGCTTTCAC CCTATATTCA CGAGATCGAC CGTCCGCTGA AACTTGCCTT CGCCGGGCTC
ATGCCGGGCA GCAACGACAA GATCGCAAAG GCCGGCAAGA ATGCCACGGC GCAGGGCGAC
GCCGTCGAGA TCGCTGACGT GCCGATTCCG GTCCCGCGCC CGAGCTTCTG A
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| Protein sequence | MAITGLSVGD RLGRMGTLAG ACAIFLAAVL PASANPRLVI DVDTLKVYEH QDIFQKWYPA
SLTKLMTAYI TFRAIKADQL TLESPVVMTK NAASEPPSKM FYKPGQKMTL DSALKMMLVK
SANDVAVAIA ETVGGTEQAF IERMNAEARR IGMTSSRFIN PHGLPGEGQY TTARDLAVLA
VTLKREFPQY ASYFALEGFT TGKKDYPNYN MLIGRFEGAD GMKTGFICAS GFNQVSSAVR
SGRRVVSVVL GEDSLGARAD ESARLLQKAL TTVATDKPSL AEIPPYGESR EVVADVSREI
CSKQAAKVRS EGRDEAGRQK LLSPYIHEID RPLKLAFAGL MPGSNDKIAK AGKNATAQGD
AVEIADVPIP VPRPSF
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