| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2565 |
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| Symbol | |
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| ID | 5323433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2662646 |
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| End bp | 2663224 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791508 |
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| Product | shikimate kinase |
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| Protein accession | YP_001328230 |
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| Protein GI | 150397763 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.412267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATG TGACCGAACC GGTTTCCGCG ACGCTGGTCG AAAGGGCCAA GCGCGCCCTC
GGTAAGCGCA ATCTCGTTTT CATAGGCCTC ATGGGGGCAG GTAAATCGGC AATCGGGCGT
CTGACCGCGC AGGCGCTTGG CGTCCCCTTC GTCGATTCCG ACCACGAGAT AGAGCGCGTC
TCGCGCATGA CGATCAGCGA TCTCTTCGCG ACCTACGGCG AGGAAGAATT CCGGGCGCTC
GAGGCTCGCG TGCTGAAGCG CCTGCTCAGG TCGGGTCCTC GGGTGGTGTC GACCGGCGGC
GGCGCCTATA TCAACGAACG CTCGCGGCGG CATATCAAAA GGGGCGGCCT GACGGTCTGG
CTCAATGCCG AGCTCGACGT TCTCTGGGAG CGGGTGAACA AACGCGACAC CCGGCCGCTT
CTGAAGACCG AGAACCCGAA GCAGACGCTC GAAAACCTGA TGCGCGCGCG CTATCCGATC
TATGCCGAGG CGGATCTGAC GGTCCTTTCG CGCGATGTGA AAAAAGAAGC GATGGTCGAG
GAGGTTCTCG CCGCCATCGC CGATCACCAG AAAGCATGA
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| Protein sequence | MNDVTEPVSA TLVERAKRAL GKRNLVFIGL MGAGKSAIGR LTAQALGVPF VDSDHEIERV
SRMTISDLFA TYGEEEFRAL EARVLKRLLR SGPRVVSTGG GAYINERSRR HIKRGGLTVW
LNAELDVLWE RVNKRDTRPL LKTENPKQTL ENLMRARYPI YAEADLTVLS RDVKKEAMVE
EVLAAIADHQ KA
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