Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2534 |
Symbol | |
ID | 5323402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2631987 |
End bp | 2632859 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640791477 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_001328199 |
Protein GI | 150397732 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAAGA CGGTGGGAAT TATCGGCGCA GGACAGATGG GCTGCGGAAT TGCCCATGTT TCGGCTGCCG CCGGATATAA GGTTCAGCTC TACGACATCG CTGCAGACCG CATCGAGGCA GGGCTTGCCA CCATCAATGG CAACCTTGCC CGGCAGGTTT CGTCCGGCAA GATGACGGAC GAAGACCGCA AGCGCGCTCT TTCCCTGATC AAGGGCTCAG GCGATATCAA CGATCTCGCC CAGGCCGATC TCGTCATCGA AGCGGTGACG GAAGACGAAA CCGTCAAGCG GAAGATCTAC GGCCAGGTTT GTCCGGTCAT GAGACCCGAT GCCATTCTGG CAACCAACAC CTCGTCTCTG TCCATCACCC GGCTTGCCTC CGCGACCGAC CGCCCCGAGC GCTTCATGGG CATCCACTTC ATGAACCCGG TCCCGGTCAT GAAGCTGGTG GAGCTCGTAC GGGGTATCGC TACGGAGGAA GGGACCTTCA AGGCGGCAAA GGAATTCGTC GCGCATCTCG ACAAGACCGT CACTGTCGCA GAAGATTTTC CCGCCTTTAT CGTCAACCGC ATCCTGCTGC CGATGATCAA CGAGGCGATC TACACCCTGT ATGAGGGCGT TGGAAGCGTC GATGCCATCG ACACCGCCAT GAAGCTCGGC GCCAACCATC CGATGGGCCC GCTGCAGCTT GCCGACTTCA TCGGTCTCGA CACCTGCCTT TCGATCATGC AGGTGCTCCA TGACGGCCTG GCGGATTCGA AGTATCGCCC CTGTCCGCTG CTCGTGAAAT ATGTCGAGGC CGGCTGGCTC GGCCGCAAGT CCGGCCGCGG CTTCTACGAC TATCGGGGCG AGGCTCCCGT ACCGACACGC TGA
|
Protein sequence | MIKTVGIIGA GQMGCGIAHV SAAAGYKVQL YDIAADRIEA GLATINGNLA RQVSSGKMTD EDRKRALSLI KGSGDINDLA QADLVIEAVT EDETVKRKIY GQVCPVMRPD AILATNTSSL SITRLASATD RPERFMGIHF MNPVPVMKLV ELVRGIATEE GTFKAAKEFV AHLDKTVTVA EDFPAFIVNR ILLPMINEAI YTLYEGVGSV DAIDTAMKLG ANHPMGPLQL ADFIGLDTCL SIMQVLHDGL ADSKYRPCPL LVKYVEAGWL GRKSGRGFYD YRGEAPVPTR
|
| |