| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2527 |
|---|
| Symbol | |
|---|
| ID | 5323395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2626168 |
|---|
| End bp | 2627040 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640791470 |
|---|
| Product | putative ribonuclease BN |
|---|
| Protein accession | YP_001328192 |
|---|
| Protein GI | 150397725 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.322273 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTCA TACGCATCAT CTGGAAGGTC GTATTCGATG CACTCTGGCA TTTTAGCGAG
GATGACGGCT GGGCGATGGC CAGTCATGTG GCCCTATCTT CGCTGATGGC CGTTTTTCCC
TTCCTGATTT TCGGCACGGC ACTCGCCAGC TTCCTGGGGG CCGATCAATT CGCCGAGACG
GCAGTCCACC TGATCTTCGA CACATGGCCC GAATCGATTG CCAAACCGGT CGCCGACGAG
GTGGTGCGCG TCTTGACTAT ACCGCGCGGC AGCCTGCTTA CGATCTCGGT TCTTGCCGCG
GCCTATTTCG CCTCGAACGG CGTCGAAGCG TTGAGGATCG CGCTCAATCG CGCTTACAGG
GTCGCCGAAA GCCGCTCCTG GTACGTGACC CGGCTTTCGA GCCTCGGCTT CGTGCTCGGT
GCCGTGCTCA TTCTCGCCGC TCTCAGCCTT CTGCTGGTGG CGGTGCCTCT GGCGGTGCGC
AATGCGGATC AGTGGTTTCC CTGGCTGGAT ACGGTTATGG CGGCGGTGGA CGATTGGGGG
CTGACGCTGA CTCTGGCCAT GCTCACGGCC GGCCTGCTCG TCGCGCATTT GTGGCTGCCG
TCCGGTCACC GCAACATCGT CGACGTATTG CCGGGAATTT TCCTCACGCT CGTGCTCTGG
TCCGTGGGCG GTTACGCTTT CGCCTCCTAT ATCGCCAATT TTTCAAGCTA TGCCACGACC
TATGCGGGGC TCGCCTCGAT CATGGTCGTG CTGGTATTTC TCTATATGCT CGGCGCGATC
TTCATCATCG GCGCGGAAAT CAACGCCGCC ATTCTGAAAT ACAAGGTGAA GCTCATGGTC
AGGCGCAGTT TCCAGGCCGG TCGCGGCGAG TAG
|
|---|
| Protein sequence | MPVIRIIWKV VFDALWHFSE DDGWAMASHV ALSSLMAVFP FLIFGTALAS FLGADQFAET
AVHLIFDTWP ESIAKPVADE VVRVLTIPRG SLLTISVLAA AYFASNGVEA LRIALNRAYR
VAESRSWYVT RLSSLGFVLG AVLILAALSL LLVAVPLAVR NADQWFPWLD TVMAAVDDWG
LTLTLAMLTA GLLVAHLWLP SGHRNIVDVL PGIFLTLVLW SVGGYAFASY IANFSSYATT
YAGLASIMVV LVFLYMLGAI FIIGAEINAA ILKYKVKLMV RRSFQAGRGE
|
|---|
| |