| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2522 |
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| Symbol | |
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| ID | 5323389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2620720 |
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| End bp | 2622363 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791464 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001328187 |
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| Protein GI | 150397720 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.519207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACCGA AGATCGAAGA CTACGACCAA CTCCTTCGCG AATTTCGCTG GCGGATTCCG
GAGACGTTCA ACATCGGCGT GGCGGTCAGC GACGCCTGGG CGGCCCGCGA TCCGGACCGG
GTCTGCCTGC AGCATTTCAG CCCGGATGGA GCGCATGCTG CGCTTACCTA TGGTGCGTTC
GCAGCGCGCT CGTCCGCCTT TGCCGGCGGC CTTGCCGCGC ACGGCGTGAG CCCCGGCGAT
CGCGTTGCTA TCCTCTTGCC GCAGGGCTTT GAGGCGGCGA TCGCCCATGC GGCTATTTAC
AAGATGGGCG CCGTCGCGCT GCCGCTGGCA CTGCTCTTCG GCGTCGAGGC GCTTGCTTAT
CGCCTCAAGG ATGCGGGCGC AGCAGCGATC ATCACCAATC GCTTCGGCTA TGAACGGCTT
GTAGCTAGCC GCGACGAACT GCCGGAACTG CGACTGGTCG TGCTTGCAGA AGGGGGCGAT
GAGCCCGGCA CCGTTCCTTT TCGTGCACTG GCAAACGGCG TGAGCCGCTT CGAGGCCGCC
GTGACGAAGC CAGACGATCC GGCGCTGATG ATCTACACCT CGGGGACGAC CGGGCCACCC
AAAGGTGCGC TGCACGGGCA TCGCGTGCTG CTCGGTCATC TCCCCGGCTT CCAGTTGCAT
CATCACTTCC TGCCGCAATC TGGCGACCGG ATGTGGACCC CCGCCGATTG GGCCTGGGCA
GGCGGTCTCC TGAACGCTCT CCTGCCGTCG CTCTTCTTCG GCGTGCCCGT GGTTTCCTCG
CCGGCGCAGA AGTTCGATGC GCATAAGGCG TTCCGGATCA TGGAAGAGAT GGACATCCGC
AATGCCTTCA TACCGCCGAC TGCGCTCAGG CTGCTCAAAT CCGTCGAGCG GCCGCGCCAG
CGCTACGCGC TGAAGCTCCG CACCCTGGGT TCGGCGGGGG AAGCGCTCGG GCGCGAGACC
TTCGAATGGG CCAAGCGGGA GCTCGGTATC GAGGTGAGCG AATTCTACGG CCAGACGGAA
TGCAATATCG TAATCTCGTC CGCGACCGGC CTCGGTGTCG TGAAGCCCGG CTCCATGGGA
AAGGCGGCAC CTGGTCATCA GGTCGCGATA ATTGACGGCC AGGGGCGAGT GCTGCCTGCC
GGTGCGGTCG GGCAGGTGGC GGTCAGGCGG CCCGATCCCG TGATGTTTCT CGGCTATTGG
GGCAATGAAC AGGCGACGAA GGCCAAGTTC ATCGGGGACT GGATGACCAC CGGCGACCAA
GGCGTGATGG ACGAGGAGGG CTATTTCACC TTCTTCGGAC GCGACGATGA CGTCATCACC
TCATCCGGCT ACCGCATCGG CCCTGGTGAG ATCGAGGACT GTCTGGCCGG GCACCCGCAT
GTTCAGCTCG CCGCCGCCGT CGGCAAACCG GACCCGATCC GGACCGAGAT CGTCAAGGCC
TTCGTGGTGC TGAAACCAGG TGTAGCTGCC GGAGAAGAGA CCGCTGCCGG GATTCGCGAA
TGGGTCAAGA ACCGGCTGTC GATGCACGAA TACCCGCGCG AGATCGCTTT CGTCGACAGC
CTGCCCATGA CCACGTCGGG CAAGGTGATC CGCCGGCTTT TGCGGCAGAA GGCGGCGGCA
GAGGCGCGCC CGTCTCACGG CTGA
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| Protein sequence | MLPKIEDYDQ LLREFRWRIP ETFNIGVAVS DAWAARDPDR VCLQHFSPDG AHAALTYGAF
AARSSAFAGG LAAHGVSPGD RVAILLPQGF EAAIAHAAIY KMGAVALPLA LLFGVEALAY
RLKDAGAAAI ITNRFGYERL VASRDELPEL RLVVLAEGGD EPGTVPFRAL ANGVSRFEAA
VTKPDDPALM IYTSGTTGPP KGALHGHRVL LGHLPGFQLH HHFLPQSGDR MWTPADWAWA
GGLLNALLPS LFFGVPVVSS PAQKFDAHKA FRIMEEMDIR NAFIPPTALR LLKSVERPRQ
RYALKLRTLG SAGEALGRET FEWAKRELGI EVSEFYGQTE CNIVISSATG LGVVKPGSMG
KAAPGHQVAI IDGQGRVLPA GAVGQVAVRR PDPVMFLGYW GNEQATKAKF IGDWMTTGDQ
GVMDEEGYFT FFGRDDDVIT SSGYRIGPGE IEDCLAGHPH VQLAAAVGKP DPIRTEIVKA
FVVLKPGVAA GEETAAGIRE WVKNRLSMHE YPREIAFVDS LPMTTSGKVI RRLLRQKAAA
EARPSHG
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