Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2517 |
Symbol | |
ID | 5323384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2612691 |
End bp | 2613545 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640791459 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_001328182 |
Protein GI | 150397715 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.657147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAGAT ACAAGACCCT TGCGGCCGCG GCCCTGGTCG CGATGATTGC AGCGGGCGTC GCCCGCGCCG AAGGGACCGA CCCGGTCATT GCGAAAGTCG GGGACCAGGA AATCCGCCAG TCGGAACTTG ATCTCGCAGT CACGAGCCTC GATCCGCAAC TTCAGCGGAT GCCCGACGAG CAGAAGCGCG CCGCAGCGCT TTCGGCCGTT ATCGACGTCA AGCTGCTTTT GAAGGACGCC GAAAAGGAAG GCCTTCAGAA CGACGAGACG TTCAAGCAGC GCATTGCCTT CCTGACGGAA CGGGAATTGC ACAACGCCTA TTTCAAAAAG CATGTGATCG ATGCCGTGAC GCCTGAAGAA GTGAAGGCGC GCTATGACAA GGAAATTGCA GCCATTCCTC CGCAGGAAGA GGTGAAGGCC CGGCATATCC TCGTCAAGAC AGAGGACGAG GCGAAGGCAG TGATCAAGGA ACTGGACGCC GGCAAGAACT TTGCGGAGCT TGCCAAGGCG AAGTCCACCG ATCCGAACAA GGACGAGGGC GGCGACCTCG GATATTTCAC CAAGGGCCGC ATGGTGCCGG AATTCGAAAC GGCAGCTTTC GCTCTGGAAA AGGGCGCCTA CACGAAGACA CCGGTCAAGA CGCAGTTCGG CTTCCACGTC ATCCTCGTCG AGGACAAGCG TCCCCAGGCG CCGCCGACGC TGGAGCAGGT CGAGCCCCAG GTTCGCCAGC TCGTCATGCG CGACAGGTAT CTCGAGCTTC TGAATTCAGC GAAGGAGAGC ACTGCAGTCG AAATCTCCGA CCCGGCTCTC AAGAAGGCCT ATGACGAGGC CGGCAAACCG CAGAAAAGCA AGTAA
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Protein sequence | MLRYKTLAAA ALVAMIAAGV ARAEGTDPVI AKVGDQEIRQ SELDLAVTSL DPQLQRMPDE QKRAAALSAV IDVKLLLKDA EKEGLQNDET FKQRIAFLTE RELHNAYFKK HVIDAVTPEE VKARYDKEIA AIPPQEEVKA RHILVKTEDE AKAVIKELDA GKNFAELAKA KSTDPNKDEG GDLGYFTKGR MVPEFETAAF ALEKGAYTKT PVKTQFGFHV ILVEDKRPQA PPTLEQVEPQ VRQLVMRDRY LELLNSAKES TAVEISDPAL KKAYDEAGKP QKSK
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