Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2502 |
Symbol | prfA |
ID | 5323369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2597447 |
End bp | 2598529 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791444 |
Product | peptide chain release factor 1 |
Protein accession | YP_001328167 |
Protein GI | 150397700 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.135893 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAAAGC TTCCCGTTGA AAAGATGCGT GAGCTGGAGC GGCGGTTCGG CGAAATCGAG GCGCGCATGT CGGCCGGACC CTCGGCTGAC GTCTACGTAA AGCTTGCCTC GGAATATTCC GAGTTGCAGC CGGTCGTATC GAAGATCCGC GCCTATGAAA AAGCGACTGC CGAGCTTGCC GACATCGGCG CAATGCTCGC AGACCGGGCG ACGGACAAGG ACATGCGCGA CCTCGCGGAG CTGGAAAAGC CAGAGATCGA GGAGCGGGTC GAAGCGCTCG AGCAGGAAAT CCAGATACTC CTCCTGCCGA AGGATGCGGC TGACGAAAAG AGCGCGATTC TCGAAATCCG CGCCGGGACG GGTGGCTCGG AAGCCGCCCT CTTTGCTGGC GATCTTTTCC GCATGTATGA GCGATATGCC GCAGGCAAGG GCTGGCGCGT CGAAGTGCTG TCGGCGAGCG AGGGCGAGGC CGGCGGCTAC AAAGAAATCA TCGCCACGGT ATCCGGCCGC GGTGTGTTCT CACGGCTGAA ATTCGAGTCC GGCGTCCACC GCGTGCAGCG TGTACCCGAG ACGGAAGCCG GTGGCCGTAT CCATACCTCG GCGGCGACCG TAGCAGTGTT ACCGGAGGCC GAAGATATCG ACATCGACAT CCGGTCGGAG GACATCCGCG TCGACACGAT GCGCTCCTCG GGCGCAGGCG GCCAGCACGT CAACACGACG GATTCGGCGG TGCGAATCAC CCATCTTCCG ACCGGTCTCG TCGTCACCAG TTCGGAAAAG TCGCAGCATC AGAACCGTGC CAAGGCCATG CAGGTGCTGC GCTCCCGGCT CTACGACATG GAGCGGCAGC GCGCCGACAG CGAACGTTCG GCCGACCGCA GGAACCAGGT AGGCTCCGGC GATCGTTCCG AGCGCATACG CACCTATAAT TTCCCGCAGG GGCGCCTGAC CGACCACCGC ATCAATCTCA CGATCTATAA GCTCGACCGG GTGATGGAGG GTGAGATCGA CGAGATCGTG GATGCGCTTC TTGCCGACTA TCAGGCGAGC CAGCTGGCGC TGCTCGGCGA AAAGCAGAAC TGA
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Protein sequence | MAKLPVEKMR ELERRFGEIE ARMSAGPSAD VYVKLASEYS ELQPVVSKIR AYEKATAELA DIGAMLADRA TDKDMRDLAE LEKPEIEERV EALEQEIQIL LLPKDAADEK SAILEIRAGT GGSEAALFAG DLFRMYERYA AGKGWRVEVL SASEGEAGGY KEIIATVSGR GVFSRLKFES GVHRVQRVPE TEAGGRIHTS AATVAVLPEA EDIDIDIRSE DIRVDTMRSS GAGGQHVNTT DSAVRITHLP TGLVVTSSEK SQHQNRAKAM QVLRSRLYDM ERQRADSERS ADRRNQVGSG DRSERIRTYN FPQGRLTDHR INLTIYKLDR VMEGEIDEIV DALLADYQAS QLALLGEKQN
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