Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2501 |
Symbol | |
ID | 5323368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2596562 |
End bp | 2597440 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791443 |
Product | HemK family modification methylase |
Protein accession | YP_001328166 |
Protein GI | 150397699 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | [TIGR00536] HemK family putative methylases [TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.132727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAA CCCTCGACAA CCTTCTTGCC GAGACCCGCG ACCGGTTGAA GGCCGCCGGC ATCGAATCGG CGGCACTCGA TGCGCGGCAC CTGGTCTCCG GCTTGCTCGA ACTCGCACTT GCCGCGCTCG TGACGCGCGG GAGGGAGCCC GTCAGCGACG AGGATGCGGC GCGCATCCGT GCCGCGGTCG AGCGCCGGGC TGCGCACGAG CCAGTCTATA GGATCCTCGG TGAGCGGGAA TTTTCCGGCC TGAAGCTCAA GCTCTCGAAG GAGACGCTGG AGCCGCGCCC GGACACCGAG ACCATGGTCG AATGCCTAAT TCCCCACGCC CGGCGGATCG CCTTGAAAAA AGGGAGTTGC CGCATCGTCG ACCTTGGAAC GGGCACGGGT GCGATTTGTC TCGCGCTTCT CGATGCGGTA CTTGACGCGC GCGGCCTCGG TACCGATATA TCGGAGGACG CATTGGCGAC GGCATGTGAA AATGCCCGCA GGAATGGCTT GGCGGGGCGC TTCGAAACGC TTCGGAGCAA TTGGCTCGAG GCGGTGAATG GCCGGTTCGA CATCATCGTC TCAAATCCGC CTTATATCCG GTCTAATGTC ATTCCAGACC TTGAGCCGGA AGTGAAATTC CACGATCCGG CCGCCGCGCT TGATGGCGGA GAGGATGGGC TGAATGCCTA TCGTGCCATC GCTTCCGACG CTGGTCGCCA TCTTGAACCA GACGGCGTGA TAGGCTTGGA AATCGGTTTC GACCAAAAGC AAGCGGTAAC GGCGCTCTTC GAGGCGCATG GCTTTCATAT GCTTTATGCC GCGAAGGACC TCGGCGGCAA CGACCGGGTC CTGGTGTTCG AGCATGATCC TGCAGCGCCG CGCGTCTGA
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Protein sequence | MPETLDNLLA ETRDRLKAAG IESAALDARH LVSGLLELAL AALVTRGREP VSDEDAARIR AAVERRAAHE PVYRILGERE FSGLKLKLSK ETLEPRPDTE TMVECLIPHA RRIALKKGSC RIVDLGTGTG AICLALLDAV LDARGLGTDI SEDALATACE NARRNGLAGR FETLRSNWLE AVNGRFDIIV SNPPYIRSNV IPDLEPEVKF HDPAAALDGG EDGLNAYRAI ASDAGRHLEP DGVIGLEIGF DQKQAVTALF EAHGFHMLYA AKDLGGNDRV LVFEHDPAAP RV
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