Gene Smed_2487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2487 
Symbol 
ID5323348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2571560 
End bp2572426 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content65% 
IMG OID640791425 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_001328154 
Protein GI150397687 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCGT TTCTCGGCAC CGGCTTGATG GGCGCGCCGA TGGCTCGGCG CCTGAGCCGT 
GCCGGTTTTC CGGTTACGGT ATGGAACCGC GACGCCGCCA AGGCCACACC GCTGGCCGCC
GACGGCGCTA AGATTGCTGC CTCGCCGGCC GATGCCGTTG CCGGAGCCAG GGTCGTCTTC
ACCATGCTGA CCAATGGCGA TGCCGTATCG GACGTCCTGT TCGAACGCGG CGTCGCCGAT
GCCTTGCCCG AAGGCGCGGT CGTGGTGGAT TGCAGCTCGA TCGCCCCGCC GATCGCCCGC
GAGCATGCGC TGAAACTGGC GGAACGTGGC ATCCGTCACC TCGACGCACC GGTTTCAGGT
GGCGTCGTGG GCGCCACAGC CGGAACGCTC GCCATCATGG CCGGCGGCGA TGGCGCCGTA
GTGGAAAGTC TGAAGGATGT CTTTGCGGCG CTTGGCCGCG TGACCCATGT GGGCCCGAGC
GGTGCCGGCC AGATCTGCAA GCTTGCCAAC CAGCAGATCG TCGCCGTCAC CATCGGCGCC
GTAGCCGAAG CGATGATCCT GGTGGAAGCA GGCGGTGCTT CGCGGGCGGC TTTCCGGGAC
GCGATCCGCG GCGGCTTCGC CGAAAGCCGG ATCCTGGAAT TGCACGGCGA CCGCATGGTG
AAGCGCGACT TCGAGCCCGG CGGAGCTTCG AGCAACCAGC TCAAGGATCT GGACGCCGTC
ATGGCGATGA TGGAAGAACT TTCCCTCGAC CTTCCCCTGA CGAAACAGGT ACGGAAGGAG
TTTGCCGCTT TCGTCGAGTC CGGCGGTGCC GGACGCGACC ACAGCGGATT GCTTCTGCAT
CTCGAAAAGC TCAACCGGAG AAACTAG
 
Protein sequence
MIAFLGTGLM GAPMARRLSR AGFPVTVWNR DAAKATPLAA DGAKIAASPA DAVAGARVVF 
TMLTNGDAVS DVLFERGVAD ALPEGAVVVD CSSIAPPIAR EHALKLAERG IRHLDAPVSG
GVVGATAGTL AIMAGGDGAV VESLKDVFAA LGRVTHVGPS GAGQICKLAN QQIVAVTIGA
VAEAMILVEA GGASRAAFRD AIRGGFAESR ILELHGDRMV KRDFEPGGAS SNQLKDLDAV
MAMMEELSLD LPLTKQVRKE FAAFVESGGA GRDHSGLLLH LEKLNRRN