| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2468 |
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| Symbol | |
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| ID | 5323329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2549200 |
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| End bp | 2550090 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791406 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001328135 |
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| Protein GI | 150397668 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.899807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCA ACGCGCTCCA GCCCAAATCG ATCGGCGGCA ACAACAATAT CCTGGAAGTC
ATTCGGCTGA GGCGCGCGGA TCTGCGCAAA TCGGACCGCA AGGTCGCAGA GCTCGTTCTG
GCCGATCCCA AGCGCGTGAT CAATGCAACG ATCGCCGAGG CGGCGGAATG GGCGGGGGTA
AGCCAGCCGA CGGTTATCCG TTTCTGCGCC TCGATCGGAT GCCAGGGATA CCAGGATTTC
AAGCTCCGCC TCGCTCAGAG CCTCGCGCTC GGCATGTCGG CGACACACTC GGTCATCGAC
GCGAGCGACA CGCCGGCCCA GGTCTCGGCG AAGATCTTCG ATTATACGAT CACCAGTCTG
GACTGGGTCC GCAACCATCT CGACCCGGTC CAGGTCAGCC GGGCCATAGA CGCGCTCTCC
AAGGCCAGCC GCATCGAATT CTTCGGTTTC GGCGCATCCG GCATCGTTGC ACGTGACGCC
CAGCAGAAGT TTCCTCTCTT CGGCGTGCCC TGCGGCGCCG AAACGGACGC CCACCAGCAG
ATCATGGTCG TATCCATGCT GAAACCGGGC GACGTCGCAG TCGTCATCTC CAATACCGGC
GCGACGCTTG CGATCATTGA AACCGCGCGC CGGGCGCGCG AAAGCGGCTG TCAGGTCATC
GGCATCGTTG GCTCGGACGG TCCGCTCGTC GAGTTCTGCG ACATAGTGCT GATGGTCGAG
ACCCTAGAGA ACACCAATAT CTATACCCCG ACGATCTCCC GAATTGCCGC GCTGACCGTT
ATCGACATCC TTTCCACCAG CGTCGCACTG CGACGCGGCG CCGAACATGT CGACCTTTTC
ACGGGCATGA AGCGCAACCT TCGTTATCTG CGCATGAGCA ACGAGACATA G
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| Protein sequence | MSTNALQPKS IGGNNNILEV IRLRRADLRK SDRKVAELVL ADPKRVINAT IAEAAEWAGV
SQPTVIRFCA SIGCQGYQDF KLRLAQSLAL GMSATHSVID ASDTPAQVSA KIFDYTITSL
DWVRNHLDPV QVSRAIDALS KASRIEFFGF GASGIVARDA QQKFPLFGVP CGAETDAHQQ
IMVVSMLKPG DVAVVISNTG ATLAIIETAR RARESGCQVI GIVGSDGPLV EFCDIVLMVE
TLENTNIYTP TISRIAALTV IDILSTSVAL RRGAEHVDLF TGMKRNLRYL RMSNET
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