| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2462 |
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| Symbol | |
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| ID | 5323323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2544231 |
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| End bp | 2544995 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640791400 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001328129 |
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| Protein GI | 150397662 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.131471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAA CCCCTTCCTA CGACGACCTG CTCGATTTCG CCGGGAAGAC GGTCGTCATC
ACGGGCGCCG CCACCGGCAT CGGCCGGGCG GTTGCGGAAG CCTTCGCCGC GAAGAATGCG
CGTGTCGCGC TGCTCGACCG GGATGCGGCC GTCTCCGGCG TTGCCGCCTC GCTCGGTTCA
GGTCACATCG CCCATGTGGT GGACGTGACG GACGAGCGGG GCGTCGGCCA GGTCGTAGAG
GCCGTGACCC AAGCCTTCGG CCGGATCGAT ATTCTGATCA ACAATGCCGG CATAGGACCC
CTTGCCCCTG CGGAAAGCTA TGCGACTGCC GACTGGGACC GGACGCTCAC CGTCAACCTC
AAGGGTGCCT TCCTTATGGC GCGCGCGGTC GCCCCGGGAA TGCTGGAGCG CAGGTCCGGC
CGCATCGTCA ACATGGCCTC CCAGGCCGCG ATCATCGGAA TCGAGGGTCA TGTCGCCTAC
TGCGCCAGCA AGGCGGGCAT CGTCGGTATG ACGAACTGCA TGGCGCTGGA ATGGGGGCCG
CGCGGCGTGA CCGTCAATGC TCTCTCGCCG ACCGTGGTGG AAACTGAGCT CGGCTTGTCC
GGCTGGGCCG GAGAGAAAGG CGACCGCGCC CGGGCCGCGA TCCCGACGCG GCGCTTCGCC
AAGCCATGGG AGATCGCCGC ATCGGTGCTC TACCTCGCCA GCGGCGCGGC TGCGATGGTG
AACGGCGCGA ACCTTAAGAT CGACGGCGGT TACACCATCG CCTGA
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| Protein sequence | MTETPSYDDL LDFAGKTVVI TGAATGIGRA VAEAFAAKNA RVALLDRDAA VSGVAASLGS
GHIAHVVDVT DERGVGQVVE AVTQAFGRID ILINNAGIGP LAPAESYATA DWDRTLTVNL
KGAFLMARAV APGMLERRSG RIVNMASQAA IIGIEGHVAY CASKAGIVGM TNCMALEWGP
RGVTVNALSP TVVETELGLS GWAGEKGDRA RAAIPTRRFA KPWEIAASVL YLASGAAAMV
NGANLKIDGG YTIA
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