Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2430 |
Symbol | |
ID | 5323291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2507844 |
End bp | 2510405 |
Gene Length | 2562 bp |
Protein Length | 853 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791368 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001328097 |
Protein GI | 150397630 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAGT TTCCGGAAAA GGCGAAGGTC GTAATCGTAG GACTGGGCGG CATCGTCGGC GCATCGATCG CCCACCACCT CATCGAGCGT GGCTGGGACG ATATCGTCGG CATCGACAAG TCGGGCATCC CGACCGATAT CGGTTCGACG GCCCATGCCT CGGACTTCTG TTATACGACG AGCCACGACT ATCTTTCGGT CTGGACGACG CAATACTCGA TCGACTTTTT CGACAGGATG GGCCACTACT CCCGCATCGG CGGCCTGGAA GTCGCACGCA CCGGCGACGA CGTCTGGATG GAAGAGATCA AGCGCAAGCT TTCCTCCGCC AAGGCTTTCG GCACGCGCGC ACATTACGTC TCGCCGGCCG AAATCAAGAA GCTGTTCCCG CTGATCGAGG AAGATCAGGT CATGGGCGGC ATGTTCGATC CGGATGCCGG TCTTGTCGTT CCGCGCTCGC AGACTGTCGC CGGCAAGCTG GTCGATGCGG CGGAAAAGTC CGGCAAGCTG CGGGTCTTCG GCAATACGCC GGCAACCGCG CTTCTAGTCG AAAATGGACG CATCAAAGGT GTCGTCACAC ATCGCGGCAC GATTCTCGCG GACCATGTCG TCGTCTGCGC CGGCATTTGG GGCCGCCTGA TCGCCGAAAT GGTCGGCGAA GACCTGCCCG TCATGCCGGT CGATCATCCG CTCACCTTCT TCGGCCCCTA CAACGAATTC GAAGGCACCG GCAAGGAAAT CGGCTTCCCG CTGCTGCGCG ACCAGGGCAA CTCGGCCTAT ATGCGCGACA CCGGCGATCC GAAGACCACC GAGGGCGGTC AGATCGAGTG GGGCTATTAC GAGACCACCA ATCCGCGCCT CTGCCATCCG CGCGACATTC TCGAAAAACA TCAGGCACGC CTGTCGCCGT CGCAGCGCGA CCTCGAGATG GAGCAGATCA TCGAGCCGCT CGAGCGCGCA ATGGAATTGA CGCCGATCCT CGGCGAGCTC GGCTATAATG AGAGCCACTC CTTCAACGGC CTGCTGCAGG TATCGGCCGC CGGCGGGCCC TCCTGCGGCG AGAGTCAGAA GGTGCGCGGC CTCTGGTACT GCGTCGCTAT CTGGGTGAAA GATGGCCCGG GCTACGGCAA GCTGATCGCA GACTGGATGA CGGACGGCCG CACCGAGATC GACCATGCGT CGATTGATTA CGCCCGCTTC TATCCGCACC AGCTCGAAGA GACGTTCATC GAGCAGCGCT GCTTCGAGGC TGCGCAGAAG ATCTACTTCC CGGCCGTGCA CCCGCGCGAG CCCTATGCGG GCGGCCGCAA CGTCAAGCGC TCGCCCTTCT ACGAGCGCGA AAAGGAACTC GGCGGCTACT TCATGGAGCT CGGCGGCTGG GAGCGCGCGC ACGGTTATGC CGCCAACGAG CACCTGCTCG AGAAATACGG CGACCGTGTT CCGGTGCGCG AGAACGAGTG GGACAGCCGC CACTTCTGGC GCGTTTCCAA CGCCGAACAT CTGGCGATGA GCGAGGATTG CGGCATCGTC AACCTCTCCC ACTTCCACAT GGTAGACATT GAAGGTCCTG ACCACGTGGA GCTTCTTGAG TGGCTCTGCG CCGCCAAGAT CGGCGGCGAC GGCAATATCG GCAAGGGCAT CTACACGCAT TTCCTCGACG ACGAGGGCAT GGTTCGGGCC GATTTCACGG TTTTCCGCAT GGCCGATCGC TGCCGTCTCG TGAACGGCGC CGATGCCGGG CCGCGCGACT TCCACTACAT GCGCCGCGTC GCGGAAGACC GGGGCCTGGA CGTCCGTATC ACAGACGTTT CGGAGAGATT CACCACGATC GGTATCTGGG GGCCGAATGC CCGCGAAACG CTGAAAAGGG TGGTGGCAGA TCCGGCCGGT CTCGATCCCG AGAATTTCCC CTTCGCCGCA ATCCGGCAGA TGGAGATCGC CGGCAAGCCG GTCTCCGCCT TCCGCATCTC CTATGTCGGC GAACAAGGCT GGGAACTGCA TATGAAATAC GAGGACGGGC TTGCCGTCTG GGACGCGCTG CGCGCCACGG GGGTCATGGC CTTCGGCGTC GAGACCTATG CCAACTCGCG CCGCATGGAA AAGAGCCTGC GCCTGCAGAA CGCAGACCTT CTCACCCAAT ATAACCTTAT CGAAGCCGAT CTTGCCCGTC CGAAAGTCAA GGAAGCGGAC TTCCGGGGCA AGGCGAAGCA CCTGGAATAC AAGGCGCGCG AGCACCAGCC CGCCATGCTT TGCACGCTCG TGATGACGGA GAACACCGAC GGGAACGGCG TGAGGCGCTA CCCGGTCGGC AACCTGCCGG TCATGGACCC GGAGACCGGC GATGTTCTGG TCGACGAACT CGGCCGCCGC TCCTACACCA CTTCGATCGC ATACGGTCCG ACGATCGGCA AGAATATCGC GCTTGCCTAT CTGCCCTGGT CCTACTGCCA GGTCGGACGA AGGCTCCATG TCGAGTATTT CGCCGAGACC TATCCCGTCG AAGTGGCCGG CGTCGGTTAC AAGCCTCTCT ACGACCCGGA GAACCTGAAG CCGCGGACGT AA
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Protein sequence | MAEFPEKAKV VIVGLGGIVG ASIAHHLIER GWDDIVGIDK SGIPTDIGST AHASDFCYTT SHDYLSVWTT QYSIDFFDRM GHYSRIGGLE VARTGDDVWM EEIKRKLSSA KAFGTRAHYV SPAEIKKLFP LIEEDQVMGG MFDPDAGLVV PRSQTVAGKL VDAAEKSGKL RVFGNTPATA LLVENGRIKG VVTHRGTILA DHVVVCAGIW GRLIAEMVGE DLPVMPVDHP LTFFGPYNEF EGTGKEIGFP LLRDQGNSAY MRDTGDPKTT EGGQIEWGYY ETTNPRLCHP RDILEKHQAR LSPSQRDLEM EQIIEPLERA MELTPILGEL GYNESHSFNG LLQVSAAGGP SCGESQKVRG LWYCVAIWVK DGPGYGKLIA DWMTDGRTEI DHASIDYARF YPHQLEETFI EQRCFEAAQK IYFPAVHPRE PYAGGRNVKR SPFYEREKEL GGYFMELGGW ERAHGYAANE HLLEKYGDRV PVRENEWDSR HFWRVSNAEH LAMSEDCGIV NLSHFHMVDI EGPDHVELLE WLCAAKIGGD GNIGKGIYTH FLDDEGMVRA DFTVFRMADR CRLVNGADAG PRDFHYMRRV AEDRGLDVRI TDVSERFTTI GIWGPNARET LKRVVADPAG LDPENFPFAA IRQMEIAGKP VSAFRISYVG EQGWELHMKY EDGLAVWDAL RATGVMAFGV ETYANSRRME KSLRLQNADL LTQYNLIEAD LARPKVKEAD FRGKAKHLEY KAREHQPAML CTLVMTENTD GNGVRRYPVG NLPVMDPETG DVLVDELGRR SYTTSIAYGP TIGKNIALAY LPWSYCQVGR RLHVEYFAET YPVEVAGVGY KPLYDPENLK PRT
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