Gene Smed_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2424 
Symbol 
ID5323285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2502491 
End bp2502889 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content59% 
IMG OID640791362 
Productcytochrome c class I 
Protein accessionYP_001328091 
Protein GI150397624 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.385069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTG CATTTGCTGC CCTGTATTTT TCGGCGTCTT TTTCAGCACT TTCGCTCTGT 
CCCACCGCCG CGCTCGCCCA GGAGGGCGAT GCCGAGGCCG GCGCTACTGT CTTCAAGAGA
TGCGCCACCT GCCATGTCAT CGACGAGGAC CAGAACAAGG TCGGCCCTTC GCTGAAGGGC
ATCATGGGCA GGACGGCCGG CACCCACCCG GATTTCAAGT ATTCGCAAGC CATGGTCGAT
GCGGGCAAGG GTGGCCTCGT CTGGGACGAA GCGACTCTGG CCGACTATCT CCGCAATCCG
AGGGCCAAGG TCAAAGGCAC CAAAATGGTT TTCCCCGGCC TGAAGAAGGA CGAGGAGCTT
GCCAACGTTA TCGCCTACCT GAAGCAGCAT TCCCAATAG
 
Protein sequence
MRIAFAALYF SASFSALSLC PTAALAQEGD AEAGATVFKR CATCHVIDED QNKVGPSLKG 
IMGRTAGTHP DFKYSQAMVD AGKGGLVWDE ATLADYLRNP RAKVKGTKMV FPGLKKDEEL
ANVIAYLKQH SQ