| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2420 |
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| Symbol | |
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| ID | 5323281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2498105 |
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| End bp | 2499367 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791358 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001328087 |
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| Protein GI | 150397620 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.228974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAAC TGATCACAGC CGCCCTGCTT GCCACCCTGA TGGCCGGCAG CGCCCTTGCA
GATACGAAGC TGAAGCTCGT GGAGGTCATA ACCAGCCCCG AGCGCACCGA AACGCTGAAG
TCGATCGTCG CCAAGTTCGA AGAGGCGAAC CCCGGCACGA CCGTCGAGAT CATTTCGCTG
CCCTGGGGCG AAGCCTTCCA GAAATTCGCC ACCATGGTAT CGGCCGGCGA AATCCCCGAT
GTCATGGAAA TGCCCGACAC CTGGCTGTCG CTCTATGCCA ATAACGGCAT GCTCGAAAGC
CTCGAGCCCT ATCTCGCAAA ATGGGAGCAC ACGCCAGGCC TCACCGAGCG CGCGCTCGAA
CTCGGCCGGG ACGTCAACGA CACAGCTTAC ATGTTGCCTT ACGGCTTCTA TCTCCGGGCG
ATGTTCTACA ACAAGAAGCT GCTCTCCGAA GCGGGTGTCG CCGAACCGCC GAAGACGATG
GACGACTTCG TCAAGGCTTC CGAGGCGGTC TCCAAGCTGC CGGGCAAATC CGGTTACTGC
CTGCGCGGCG GTCCGGGCGG GCTCAACGGC TGGGTGATGT TCGGCGCGAC CATGGCCGGC
GACAACAAGT TCTTCAACGA GGACGGCACT TCCACGATGA ACAGCGAAGG CTGGATCAAA
GGCCTCACCT GGGTCATCGA CCTCTACAAG AAGGGTCTGG CGCCGAAGGA TAGCGTCAAC
TGGGGCTTCA ACGAGATCGT CGCGGGCTTC TACAGCGGCA CCTGCGCCTT TCTCGACCAG
GACCCGGATG CCTTGATCGC TATTGCCCAG CGCATGAAGC CGGAGGATTT CGGCGTGACC
ACCATGCCGA AGGGGCCGAG CGGCAAGGCC TTCACCACGA TCGGCTTCGC CGGCTGGTCG
ATCCTTGCCG CCAGCCAGAA CAAGGATCTC TCCTGGAAGC TGATCGAAAC GCTGGAAGGC
CCGGAAGGCA ATATCGAGTG GAATAAGCGC ACCGGCGCGC TGCCCGTTCA CAAGTCGGCC
GAAAAGGACC CCTTTTATGC GAGCGCGCAG TTCAAGGGCT GGTTCGACGA ACTCGCCGAC
AAGGACGTCG TGCTGACGGT CATGCCGACC TATCTCGAAG AATTCGCCTT CTTCAAAGAT
TCGCTCGCCA TCAAGACGAC CCAGGAAGCT CTCCTCGGCG ACATCACGCC GGAAGAACTT
GCCAACCAGT GGGCCGACTA CCTGACCAAG GCTCAGCAGA AATATCTCGC GAACAAGAAA
TAG
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| Protein sequence | MRKLITAALL ATLMAGSALA DTKLKLVEVI TSPERTETLK SIVAKFEEAN PGTTVEIISL
PWGEAFQKFA TMVSAGEIPD VMEMPDTWLS LYANNGMLES LEPYLAKWEH TPGLTERALE
LGRDVNDTAY MLPYGFYLRA MFYNKKLLSE AGVAEPPKTM DDFVKASEAV SKLPGKSGYC
LRGGPGGLNG WVMFGATMAG DNKFFNEDGT STMNSEGWIK GLTWVIDLYK KGLAPKDSVN
WGFNEIVAGF YSGTCAFLDQ DPDALIAIAQ RMKPEDFGVT TMPKGPSGKA FTTIGFAGWS
ILAASQNKDL SWKLIETLEG PEGNIEWNKR TGALPVHKSA EKDPFYASAQ FKGWFDELAD
KDVVLTVMPT YLEEFAFFKD SLAIKTTQEA LLGDITPEEL ANQWADYLTK AQQKYLANKK
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