| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2392 |
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| Symbol | |
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| ID | 5323253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2468208 |
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| End bp | 2469326 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791330 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001328059 |
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| Protein GI | 150397592 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0457851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGT CTCTTCTGTC GGCCGTTGCG CTGACAGCAA TGCTCGCCTT CAGCGGCACC
GCATGGGCTG AGATCCTGGT CGGCGTCGGA GCTCCGCTAA CCGGTCCGAA CGCCGCATTC
GGCGCGCAGA TTCAGAAAGG TGCAGAGCAG GCCGCCGAAG ACATCAATGC TGCAGGCGGC
ATCAATGGGG AACAGATCAG GATTGTGCTG GGCGATGACG TTTCGGACCC TAAACAGGGT
GTTTCCGTTG CCCAGAAATT CGTCGCCGAC GGCGTGAAGT TTGTCGTTGG TCACTTCAAC
TCGGGTGTGT CGATCCCTGC ATCGGAAATC TACGCCGAAA ACGGCCTCCT GCAGGTCACG
CCTGCCTCGA CCAACCCGCA GTTCACCGAA CGCGGCCTGT GGAATACCTT CCGCACCTGC
GGCCGGGACG ACCAGCAGGG CGCTGTTGCC GGCGCCTATA TCGCGGCCAA TTTCAAGGAT
GCGAAGGTCG CCGTCATTCA CGACAAGACG CCCTATGGTC AGGGCCTTGC CGACGAAACC
AAGAAGTCGA TGAACGAAGC CGGCGTCACC GAGGCCCTCT ATGAAGGCAT CAACACCGGC
GACAAGGACT TCTCCGCCCT TATTGCCAAG ATGAAGCAGG CTGGCGTTTC GATCGTCTAT
TACGGCGGTC TGCACACGGA AGCCGGCCTG ATCATGCGTC AGATGAAGGA CCAGGGCCTG
AAGGCGACGC TGATGTCGGG CGACGGCATC GTCTCGAACG AACTGGCCTC GATCGCCGGC
GACGCCGTTG ACGGTACGCT GATGACCTTC GCACCGGATC CGCGCAAGAG CCCGGCTGCC
AAGGATCTCG TCGAGAAGTT CCGCACTGCG GGCTTTGAGC CGGAAGCCTA CACGCTCTAT
GCTTATGCGG CCCTTCAGGT CATTGCAGAA GGTGCCAAGG CTGCCGGCAA TAGCGATCCG
CAGGCCGTCG CCGAAGCGAT CAAGGCCAAA GGCCCGTTTA AGACCGCGAT CGGCGAACTC
GGCTTCGACG AAAAGGGCGA CATCACCCGT CCGGACTACG TCATGTACAC CTGGAAGAAG
GGTGACGACG GCAAGTTCAG CTACTTCCAG AACGAATAG
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| Protein sequence | MRKSLLSAVA LTAMLAFSGT AWAEILVGVG APLTGPNAAF GAQIQKGAEQ AAEDINAAGG
INGEQIRIVL GDDVSDPKQG VSVAQKFVAD GVKFVVGHFN SGVSIPASEI YAENGLLQVT
PASTNPQFTE RGLWNTFRTC GRDDQQGAVA GAYIAANFKD AKVAVIHDKT PYGQGLADET
KKSMNEAGVT EALYEGINTG DKDFSALIAK MKQAGVSIVY YGGLHTEAGL IMRQMKDQGL
KATLMSGDGI VSNELASIAG DAVDGTLMTF APDPRKSPAA KDLVEKFRTA GFEPEAYTLY
AYAALQVIAE GAKAAGNSDP QAVAEAIKAK GPFKTAIGEL GFDEKGDITR PDYVMYTWKK
GDDGKFSYFQ NE
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