Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2390 |
Symbol | |
ID | 5323251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2465841 |
End bp | 2466815 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791328 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001328057 |
Protein GI | 150397590 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.129625 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTGCGA GATTCCGTAT TCTTGTCACT CGCCGCTGGC CGCGAGCCGT CGAACAGGTC TTGGCCGAAA GGTTCGAGAC AGTTCTCAAC GAGGAGGACA GGCCGCTCGA CAGAAGTGCC CTCGCGGATG CGCTGCGCAA TTTCGATGCG GTGCTGCCGA CCGTCTCCGA CCGCCTGCCG GAGGATGTTT TCGCGGGCGA GGGGCTTCGC GCCCGGATTC TCGGCAATTT CGGGGTGGGC TACAATCATA TCGACATCGA GGCTGCCAAG GCTGCAGGTA TCGTGGTGAC GAACACGCCA GGCGTTCTGA CCGACTGCAC CGCAGACCTC GCGGTATCGC TGCTGCTTGC GGTCGCGCGG CGCGCGGGCG AGGGCGAGCG GCAGGTGAGG ACCGGCACTT GGACTGGCTG GCGGCCGACC CATATGATCG GGACGAAGGT AACCGGAAAG ACACTCGGCA TCATCGGATT CGGGCGCATC GGCAAGGCCA TGGCGAAGCG CTGCCATTTC GGCTTCGACA TGGATGTCGT CTTCTACAAT CGATCGAGAA TCGCACCGGA GGAAGCGGCT CGATTCGGGG CACGACAGTT CCGCACGGTC GAGAACGTAC TCAAGGCAGC AGATTTCGTG TCGCTGCATT GCCCGGGCGG CGGCGAGAAC CGGAATCTGA TCGACGCGGA GCGTCTGGCG GCGATGAAGC CCGGCGCCTA CCTCATCAAC ACGGCGCGCG GCGATGTCGT CGATGAAGCC GCGTTGATCG AGGCCCTCGA GAAGGGCGTG ATCCGCGGCG CCGGTCTCGA CGTCTATGCG GCAGAGCCGG ACGTACCGGC CCGTCTGAGC GCGCTTGAAA ACGTCGTGCT GCTACCGCAT CTCGGAAGCG CCACGGAGGA GACGCGCACG GCAATGGGAA TGAAGGTGGT CGACAACGTC ACGGCTTTCT TCGCCGGCCT GGCGCCGCCG GACCGAGTGG CGTGA
|
Protein sequence | MTARFRILVT RRWPRAVEQV LAERFETVLN EEDRPLDRSA LADALRNFDA VLPTVSDRLP EDVFAGEGLR ARILGNFGVG YNHIDIEAAK AAGIVVTNTP GVLTDCTADL AVSLLLAVAR RAGEGERQVR TGTWTGWRPT HMIGTKVTGK TLGIIGFGRI GKAMAKRCHF GFDMDVVFYN RSRIAPEEAA RFGARQFRTV ENVLKAADFV SLHCPGGGEN RNLIDAERLA AMKPGAYLIN TARGDVVDEA ALIEALEKGV IRGAGLDVYA AEPDVPARLS ALENVVLLPH LGSATEETRT AMGMKVVDNV TAFFAGLAPP DRVA
|
| |