| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2383 |
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| Symbol | ureC |
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| ID | 5323244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2461200 |
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| End bp | 2462912 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791321 |
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| Product | urease subunit alpha |
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| Protein accession | YP_001328050 |
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| Protein GI | 150397583 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0804] Urea amidohydrolase (urease) alpha subunit |
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| TIGRFAM ID | [TIGR01792] urease, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.219851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTACA AAATGTCGCG TGCGGCCTAT GCCAACATGT TCGGTCCGAC CGTGGGCGAC
AAGGTGCGGT TGGCCGATAC CGAACTCTTC ATCGAGGTGG AAAGGGATTT CACCACCCAT
GGCGAGGAGG TGAAGTTCGG GGGCGGCAAA GTCATCCGCG ACGGCATGGG CCAAAGCCAG
GTGACCCGCG AAGGCGGTGC GGTCGACACG GTGATCACCA ATGCATTGAT CGTCGATCAT
TGGGGGATCG TGAAGGCGGA TATCGGACTG AAGGACGGGC GCATCTCGGC AATAGGGAAG
GCCGGCAATC CCGACACGCA GGCCGGTGTC ACCATCATCG TCGGCCCGGG CACGGAGGTC
ATTGCGGGCG AGGGCAAGAT CGTCACGGCG GGGGGCATGG ACAGCCATAT CCACTTCATC
TGCCCGCAAC AGATCGACGA GGCGCTGATG AGCGGTATCA CCTGCATGCT CGGCGGCGGA
ACGGGGCCGG CGCACGGCAC GCTCGCCACG ACCTGCACGC CGGGCCCCTG GCACATCGCC
CGCATGATTG AAGCGGCGGA TGCCTTTCCC ATGAATCTCG CCTTTGCCGG AAAGGGCAAT
GCGTCGCTGC CCGGCGCACT CGTGGAAATG GTGCTGGGCG GCGCCACCTC GCTGAAGCTC
CACGAGGACT GGGGCACCAC ACCGGCAGCC ATCGATTGCT GCCTTTCGGT TGCGGACGAA
TACGACGTGC AGGTGATGAT CCACACGGAT ACGCTGAACG AAAGCGGCTT CGTCGAGGAT
ACGATTGCTG CGATAAAGGG CAGGACGATC CATGCCTATC ACACGGAAGG GGCTGGCGGC
GGCCACGCGC CGGATATCAT CAGGATCTGC GGCCAGCCGA ACGTCATCCC GTCCTCGACC
AATCCGACGC GGCCTTATAC CGTGAACACG CTGGCTGAAC ATCTGGACAT GCTGATGGTC
TGCCATCACC TGTCTCCCAG CATTCCGGAA GACATCGCCT TCGCCGAAAG CCGTATCCGC
AAGGAGACTA TCGCGGCGGA AGATATCCTC CACGACATCG GCGCCTTCTC GATCATTTCT
TCCGACAGCC AGGCGATGGG GCGCGTCGGC GAGGTGGCGA TCCGCACCTG GCAGACCGCC
GACAAGATGA AGCGCCAGCG TGGGCGGCTC AAGGAGGAGA GCGGCGGGAA TGACAATTTC
CGCGTCAAGC GCTACATCGC CAAATACACG ATCAACCCGG CGATCGCCCA TGGCCTCAGC
CATGAGATCG GCTCTCTCGA AACCGGCAAG CGCGCCGATC TCGTCCTGTG GAATCCAACC
TTCTTCGGCG TGAAGCCCGA CATGGTGCTG CTGGGCGGAA CGATCGCCGC AGCACCGATG
GGGGATCCAA ACGCCTCGAT TCCCACTCCG CAGCCGGTCC ATTATCGGCC AATGTTCGGC
GCCTATGGAA AGAGCCGGAC CAACTCCTCG GTCACTTTCG TTTCGCAGGC CTCGCTCGAT
GCGGGGCTCG CCGGCAGGCT TGGCGTCGCC AAGGCGCTCG TTGCCGTCCA GAACACCCGC
GGCGGCATCG GCAAGGCGTC GATGGTCCAC AACAGCCTCA CGCCACATAT CGAGGTCGAC
CCCGAAACCT ACGAGGTTCG CGCCAACGGC GAGCTCCTCA CCTGCGAGCC GGCGTCGGTA
CTGCCAATGG CGCAGCGCTA TTTCTTGTTC TAG
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| Protein sequence | MSYKMSRAAY ANMFGPTVGD KVRLADTELF IEVERDFTTH GEEVKFGGGK VIRDGMGQSQ
VTREGGAVDT VITNALIVDH WGIVKADIGL KDGRISAIGK AGNPDTQAGV TIIVGPGTEV
IAGEGKIVTA GGMDSHIHFI CPQQIDEALM SGITCMLGGG TGPAHGTLAT TCTPGPWHIA
RMIEAADAFP MNLAFAGKGN ASLPGALVEM VLGGATSLKL HEDWGTTPAA IDCCLSVADE
YDVQVMIHTD TLNESGFVED TIAAIKGRTI HAYHTEGAGG GHAPDIIRIC GQPNVIPSST
NPTRPYTVNT LAEHLDMLMV CHHLSPSIPE DIAFAESRIR KETIAAEDIL HDIGAFSIIS
SDSQAMGRVG EVAIRTWQTA DKMKRQRGRL KEESGGNDNF RVKRYIAKYT INPAIAHGLS
HEIGSLETGK RADLVLWNPT FFGVKPDMVL LGGTIAAAPM GDPNASIPTP QPVHYRPMFG
AYGKSRTNSS VTFVSQASLD AGLAGRLGVA KALVAVQNTR GGIGKASMVH NSLTPHIEVD
PETYEVRANG ELLTCEPASV LPMAQRYFLF
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